Influenza A (H3N2) Outbreak, Nepal
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Public Domain
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Aug 2005
Details
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Alternative Title:Emerg Infect Dis
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Personal Author:Daum, Luke T. ; Shaw, Michael W. ; Klimov, Alexander I. ; Canas, Linda C. ; Macias, Elizabeth A. ; Niemeyer, Debra ; Chambers, James P. ; Renthal, Robert ; Shrestha, Sanjaya K. ; Acharya, Ramesh P. ; Huzdar, Shankar P. ; Rimal, Nirmal ; Myint, Khin S. ; Gould, Philip
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Description:In July 2004, an outbreak of influenza A (H3N2) was detected at 3 Bhutanese refugee camps in southeastern Nepal. Hemagglutination inhibition showed that approximately 40% of the viruses from this outbreak were antigenically distinct from the A/Wyoming/3/03 vaccine strain. Four amino acid differences were observed in most of the 26 isolates compared with the A/Wyoming/3/2003 vaccine strain. All 4 substitutions are located within or adjacent to known antibody-binding sites. Several isolates showed a lysine-to-asparagine substitution at position 145 (K145N) in the hemagglutinin molecule, which may be noteworthy since position 145 is located within a glycosylation site and adjacent to an antibody-binding site. H3N2 viruses continue to drift from the vaccine strain and may remain as the dominant strains during the 2005-2006 influenza season. Thus, the 2005-2006 Northern Hemisphere vaccine strain was changed to A/California/7/2004, a virus with all 4 amino acid substitutions observed in these Nepalese isolates.
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Subjects:
- Research
- Keywords: Influena A
- H3N2
- Hemagglutinin
- genetic drift
- variant
- Amino Acid Sequence
- Antigenic Variation
- Child
- Disease Outbreaks
- Female
- Hemagglutination Inhibition Tests
- Hemagglutinins
- Humans
- Influenza A Virus, H3N2 Subtype
- Influenza A virus
- Influenza, Human
- Male
- Models, Molecular
- Molecular Sequence Data
- Nepal
- Phylogeny
- RNA, Viral
- Reverse Transcriptase Polymerase Chain Reaction
- Sequence Alignment
- Sequence Analysis, DNA
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Source:Emerg Infect Dis. 11(8):1186-1191.
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Document Type:
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Volume:11
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Issue:8
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Main Document Checksum:urn:sha256:8ba4e69272d50144251e91c85d3b4859ae23da40da29d8aa47ef878e0151cc73
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Emerging Infectious Diseases