Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness

McLaughlin, Heather P.; Bugrysheva, Julia V.; Conley, Andrew B.; Gulvik, Christopher A.; Cherney, Blake; Kolton, Cari B.; Marston, Chung K.; Saile, Elke; Swaney, Erin; Lonsway, David; Gargis, Amy S.; Kongphet-Tran, Thiphasone; Lascols, Christine; Michel, Pierre; Villanueva, Julie; Hoffmaster, Alex R.; Gee, Jay E.; Sue, David

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CDC STACKS serves as an archival repository of CDC-published products including scientific findings, journal articles, guidelines, recommendations, or other public health information authored or co-authored by CDC or funded partners. As a repository, CDC STACKS retains documents in their original published format to ensure public access to scientific information.

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Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness

Feb 2020
By McLaughlin, Heather P. ; Bugrysheva, Julia V. ; Conley, Andrew B. ; ...
Source: Emerg Infect Dis. 26(2):358-361

[PDF-822.34 KB]

English

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Details:

Alternative Title:

Emerg Infect Dis
Personal Author:

McLaughlin, Heather P. ; Bugrysheva, Julia V. ; Conley, Andrew B. ; Gulvik, Christopher A. ; Cherney, Blake ; ... More +

McLaughlin, Heather P. ; Bugrysheva, Julia V. ; Conley, Andrew B. ; Gulvik, Christopher A. ; Cherney, Blake ; Kolton, Cari B. ; Marston, Chung K. ; Saile, Elke ; Swaney, Erin ; Lonsway, David ; Gargis, Amy S. ; Kongphet-Tran, Thiphasone ; Lascols, Christine ; Michel, Pierre ; Villanueva, Julie ; Hoffmaster, Alex R. ; Gee, Jay E. ; Sue, David Less -
Description:

Human anthrax cases necessitate rapid response. We completed Bacillus anthracis nanopore whole-genome sequencing in our high-containment laboratory from a human anthrax isolate hours after receipt. The de novo assembled genome showed no evidence of known antimicrobial resistance genes or introduced plasmid(s). Same-day genomic characterization enhances public health emergency response.
Subjects:

[+]

Anthrax Bacillus Anthracis Bacteria Bioterrorism And Preparedness Dispatch Emergency Preparedness Nanopore Rapid Nanopore Whole-Genome Sequencing For Anthrax Emergency Preparedness Whole-genome Sequencing Zoonoses
Source:

Emerg Infect Dis. 26(2):358-361
Pubmed ID:

31961318
Pubmed Central ID:

PMC6986837
Document Type:

Journal Article
Volume:

26
Issue:

2
Collection(s):

Emerging Infectious Diseases
Main Document Checksum:

[+]

urn:sha256:b5c3c1e7b31a048a7384f40d9509c4821fbb4ce8472495334ed82b043de9bf03
Download URL:

https://stacks.cdc.gov/view/cdc/84843/cdc_84843_DS1.pdf
File Type:

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