Detecting SARS-CoV-2 Omicron B.1.1.529 Variant in Wastewater Samples by Using Nanopore Sequencing

Rasmussen, Lasse D.; Richter, Stine R.; Midgley, Sofie E.; Franck, Kristina T.

doi:10.3201/eid2806.220194

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Detecting SARS-CoV-2 Omicron B.1.1.529 Variant in Wastewater Samples by Using Nanopore Sequencing

6 2022
By Rasmussen, Lasse D. ; Richter, Stine R. ; Midgley, Sofie E. ; ...
http://dx.doi.org/10.3201/eid2806.220194
Source: Emerg Infect Dis. 2022; 28(6):1296-1298

[PDF-365.51 KB]

English

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Details:

Alternative Title:

Emerg Infect Dis
Personal Author:

Rasmussen, Lasse D. ; Richter, Stine R. ; Midgley, Sofie E. ; Franck, Kristina T.

Rasmussen, Lasse D. ; Richter, Stine R. ; Midgley, Sofie E. ; Franck, Kristina T. Less -
Description:

We report wastewater surveillance for SARS-CoV-2 variants of concern by using mutation-specific, real-time PCR and rapid nanopore sequencing. This surveillance might be useful for an early warning in a scenario in which a new variant is emerging, even in areas that have low virus incidences.
Subjects:

[+]

Covid-19 Humans Nanopore Sequencing Sars-Cov-2 Waste Water Wastewater-Based Epidemiological Monitoring
Source:

Emerg Infect Dis. 2022; 28(6):1296-1298
Pubmed ID:

35362410
Pubmed Central ID:

PMC9155873
Document Type:

Journal Article
Genre:

Letter
Collection(s):

Emerging Infectious Diseases
Main Document Checksum:

[+]

urn:sha256:d802002d637c58fc5aa9b1109f11df14b6504f12893ee9c0c36a2dd4a3839780
Download URL:

https://stacks.cdc.gov/view/cdc/118192/cdc_118192_DS1.pdf
File Type:

22-0194.nxml

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