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Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex

CITE Title : Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex Personal Author(s) : Konermann, Silvana;Brigham, Mark D.;Trevino, Alexandro E.;Joung, Julia;Abudayyeh, Omar O.;Barcena, Clea;Hsu, Patrick D.;Habib, Naomi;Gootenberg, Jonathan S.;Nishimasu, Hiroshi;Nureki, Osamu;Zhang, Feng; Published Date : Dec 10 2014 Source : Nature. 517(7536):583-588. URL : https://stacks.cdc.gov/view/cdc/30833 Konermann, Silvana et al. (2014). Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex. 517(7536). Konermann, Silvana et al. "Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex" 517, no. 7536 (2014) Konermann, Silvana et al. "Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex" vol. 517, no. 7536, 2014 Export RIS Citation Information.

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Konermann, Silvana ;

Brigham, Mark D.

Dec 10 2014 | Nature. 517(7536):583-588.

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Systematic interrogation of gene function requires the ability to perturb gene expression in a robust and generalizable manner. Here we describe struc...
Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection.

CITE Title : Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection. Personal Author(s) : Ray, M. E.;Guan, X. Y.;Slovak, M. L.;Trent, J. M.;Meltzer, P. S.; Published Date : Jul 1994 Source : Br J Cancer. 70(1):85-90. URL : https://stacks.cdc.gov/view/cdc/22953 Ray, M. E. et al. (1994). Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection.. 70(1). Ray, M. E. et al. "Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection." 70, no. 1 (1994) Ray, M. E. et al. "Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection." vol. 70, no. 1, 1994 Export RIS Citation Information.

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Ray, M. E. ;

Guan, X. Y.

Jul 1994 | Br J Cancer. 70(1):85-90.

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Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells

CITE Title : Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells Personal Author(s) : Shalem, Ophir;Sanjana, Neville E.;Hartenian, Ella;Shi, Xi;Scott, David A.;Mikkelson, Tarjei;Heckl, Dirk;Ebert, Benjamin L.;Root, David E.;Doench, John G.;Zhang, Feng; Published Date : Dec 12 2013 Source : Science. 343(6166):84-87. URL : https://stacks.cdc.gov/view/cdc/30029 Shalem, Ophir et al. (2013). Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells. 343(6166). Shalem, Ophir et al. "Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells" 343, no. 6166 (2013) Shalem, Ophir et al. "Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells" vol. 343, no. 6166, 2013 Export RIS Citation Information.

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Shalem, Ophir ;

Sanjana, Neville E.

Dec 12 2013 | Science. 343(6166):84-87.

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The simplicity of programming the CRISPR (clustered regularly interspaced short palindromic repeats)-associated nuclease Cas9 to modify specific genom...
Efficient and quantitative high-throughput transfer RNA sequencing

CITE Title : Efficient and quantitative high-throughput transfer RNA sequencing Personal Author(s) : Zheng, Guanqun;Qin, Yidan;Clark, Wesley C.;Dai, Qing;Yi, Chengqi;He, Chuan;Lambowitz, Alan M.;Pan, Tao; Published Date : 9 2015;9-2015; Source : Nat Methods. 12(9):835-837 URL : https://stacks.cdc.gov/view/cdc/36311 Zheng, Guanqun et al. (2015). Efficient and quantitative high-throughput transfer RNA sequencing. 12(9). Zheng, Guanqun et al. "Efficient and quantitative high-throughput transfer RNA sequencing" 12, no. 9 (2015) Zheng, Guanqun et al. "Efficient and quantitative high-throughput transfer RNA sequencing" vol. 12, no. 9, 2015 Export RIS Citation Information.

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Zheng, Guanqun ;

Qin, Yidan

9 2015 | Nat Methods. 12(9):835-837

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Despite its biological importance, tRNA has not been adequately sequenced by standard methods because of its abundant post-transcriptional modificatio...
High-throughput functional genomics using CRISPR-Cas9

CITE Title : High-throughput functional genomics using CRISPR-Cas9 Personal Author(s) : Shalem, Ophir;Sanjana, Neville E.;Zhang, Feng; Published Date : 5 2015;5-2015; Source : Nat Rev Genet. 2015; 16(5):299-311 URL : https://stacks.cdc.gov/view/cdc/32067 Shalem, Ophir et al. (2015). High-throughput functional genomics using CRISPR-Cas9. 16(5). Shalem, Ophir and Sanjana, Neville E. and Zhang, Feng "High-throughput functional genomics using CRISPR-Cas9" 16, no. 5 (2015) Shalem, Ophir et al. "High-throughput functional genomics using CRISPR-Cas9" vol. 16, no. 5, 2015 Export RIS Citation Information.

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Shalem, Ophir ;

Sanjana, Neville E.

5 2015 | Nat Rev Genet. 2015; 16(5):299-311

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Forward genetic screens are powerful tools for the discovery and functional annotation of genetic elements. Recently, the RNA-guided CRISPR (clustered...
Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses

CITE Title : Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses Personal Author(s) : Marine, Rachel L.;Magaña, Laura C.;Castro, Christina J.;Zhao, Kun;Montmayeur, Anna M.;Schmidt, Alexander;Diez-Valcarce, Marta;Ng, Terry Fei Fan;Vinjé, Jan;Burns, Cara C.;Nix, W. Allan;Rota, Paul A.;Oberste, M. Steven; Published Date : 6 2020;6-2020; Source : J Virol Methods. 280:113865 URL : https://stacks.cdc.gov/view/cdc/117648 Marine, Rachel L. et al. (2020). Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses. 280 Marine, Rachel L. et al. "Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses" 280 (2020) Marine, Rachel L. et al. "Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses" vol. 280, 2020 Export RIS Citation Information.

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Marine, Rachel L. ;

Magaña, Laura C.

6 2020 | J Virol Methods. 280:113865

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Next-generation sequencing is a powerful tool for virological surveillance. While Illumina® and Ion Torrent® sequencing platforms are used extensive...
Highly Pathogenic Avian Influenza Virus Nucleoprotein Interacts with TREX Complex Adaptor Protein Aly/REF

CITE Title : Highly Pathogenic Avian Influenza Virus Nucleoprotein Interacts with TREX Complex Adaptor Protein Aly/REF Personal Author(s) : Balasubramaniam, Vinod R. M. T.;Hong Wai, Tham;Ario Tejo, Bimo;Omar, Abdul Rahman;Syed Hassan, Sharifah; Published Date : Sep 20 2013 Source : PLoS One. 2013; 8(9). URL : https://stacks.cdc.gov/view/cdc/21157 Balasubramaniam, Vinod R. M. T. et al. (2013). Highly Pathogenic Avian Influenza Virus Nucleoprotein Interacts with TREX Complex Adaptor Protein Aly/REF. 8(9). Balasubramaniam, Vinod R. M. T. et al. "Highly Pathogenic Avian Influenza Virus Nucleoprotein Interacts with TREX Complex Adaptor Protein Aly/REF" 8, no. 9 (2013) Balasubramaniam, Vinod R. M. T. et al. "Highly Pathogenic Avian Influenza Virus Nucleoprotein Interacts with TREX Complex Adaptor Protein Aly/REF" vol. 8, no. 9, 2013 Export RIS Citation Information.

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Balasubramaniam, Vinod R. M. T. ;

Hong Wai, Tham

Sep 20 2013 | PLoS One. 2013; 8(9).

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We constructed a novel chicken (Gallus gallus) lung cDNA library fused inside yeast acting domain vector (pGADT7). Using yeast two-hybrid screening wi...
Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes

CITE Title : Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes Personal Author(s) : Beliveau, Brian J.;Boettiger, Alistair N.;Avendaño, Maier S.;Jungmann, Ralf;McCole, Ruth B.;Joyce, Eric F.;Kim-Kiselak, Caroline;Bantignies, Frédéric;Fonseka, Chamith Y.;Erceg, Jelena;Hannan, Mohammed A.;Hoang, Hien G.;Colognori, David;Lee, Jeannie T.;Shih, William M.;Yin, Peng;Zhuang, Xiaowei;Wu, Chao-ting; Published Date : 05 12 2015 Source : Nat Commun. 6:7147 URL : https://stacks.cdc.gov/view/cdc/32009 Beliveau, Brian J. et al. (2015). Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes. 6 Beliveau, Brian J. et al. "Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes" 6 (2015) Beliveau, Brian J. et al. "Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes" vol. 6, 2015 Export RIS Citation Information.

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Beliveau, Brian J. ;

Boettiger, Alistair N.

05 12 2015 | Nat Commun. 6:7147

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Fluorescence in situ hybridization (FISH) is a powerful single-cell technique for studying nuclear structure and organization. Here we report two adva...