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An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed, with an example from human genome epidemiology

CITE Title : An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed, with an example from human genome epidemiology Personal Author(s) : Yu, Wei;Yesupriya, Ajay;Wulf, Anja;Qu, Junfeng;Khoury, Muin J;Gwinn, Marta; Published Date : Nov 09 2007 Source : BMC Bioinformatics. 2007; 8:436. URL : https://stacks.cdc.gov/view/cdc/3358 Yu, Wei et al. (2007). An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed, with an example from human genome epidemiology. 8 Yu, Wei et al. "An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed, with an example from human genome epidemiology" 8 (2007) Yu, Wei et al. "An open source infrastructure for managing knowledge and finding potential collaborators in a domain-specific subset of PubMed, with an example from human genome epidemiology" vol. 8, 2007 Export RIS Citation Information.

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Yu, Wei ;

Yesupriya, Ajay

Nov 09 2007 | BMC Bioinformatics. 2007; 8:436.

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BackgroundIdentifying relevant research in an ever-growing body of published literature is becoming increasingly difficult. Establishing domain-specif...
Local cell metrics: a novel method for analysis of cell-cell interactions

CITE Title : Local cell metrics: a novel method for analysis of cell-cell interactions Personal Author(s) : Su, Jing;Zapata, Pedro J;Chen, Chien-Chiang;Meredith, J Carson; Published Date : Oct 23 2009 Source : BMC Bioinformatics. 2009; 10:350. URL : https://stacks.cdc.gov/view/cdc/22877 Su, Jing et al. (2009). Local cell metrics: a novel method for analysis of cell-cell interactions. 10 Su, Jing et al. "Local cell metrics: a novel method for analysis of cell-cell interactions" 10 (2009) Su, Jing et al. "Local cell metrics: a novel method for analysis of cell-cell interactions" vol. 10, 2009 Export RIS Citation Information.

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Su, Jing ;

Zapata, Pedro J

Oct 23 2009 | BMC Bioinformatics. 2009; 10:350.

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BackgroundThe regulation of many cell functions is inherently linked to cell-cell contact interactions. However, effects of contact interactions among...
Real-time PCR assays for genotyping of Cryptococcus gattii in North America

CITE Title : Real-time PCR assays for genotyping of Cryptococcus gattii in North America Personal Author(s) : Kelley, Erin J;Driebe, Elizabeth M;Etienne, Kizee;Brandt, Mary E;Schupp, James M;Gillece, John D;Trujillo, Jesse S;Lockhart, Shawn R;Deak, Eszter;Keim, Paul S;Engelthaler, David M; Published Date : May 13 2014 Source : BMC Microbiol. 2014; 14:125. URL : https://stacks.cdc.gov/view/cdc/27324 Kelley, Erin J et al. (2014). Real-time PCR assays for genotyping of Cryptococcus gattii in North America. 14 Kelley, Erin J et al. "Real-time PCR assays for genotyping of Cryptococcus gattii in North America" 14 (2014) Kelley, Erin J et al. "Real-time PCR assays for genotyping of Cryptococcus gattii in North America" vol. 14, 2014 Export RIS Citation Information.

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Kelley, Erin J ;

Driebe, Elizabeth M

May 13 2014 | BMC Microbiol. 2014; 14:125.

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BackgroundCryptococcus gattii has been the cause of an ongoing outbreak starting in 1999 on Vancouver Island, British Columbia and spreading to mainla...
Authentication scheme for routine verification of genetically similar laboratory colonies: a trial with Anopheles gambiae

CITE Title : Authentication scheme for routine verification of genetically similar laboratory colonies: a trial with Anopheles gambiae Personal Author(s) : Wilkins, Elien E;Marcet, Paula L;Sutcliffe, Alice C;Howell, Paul I; Published Date : Oct 22 2009 Source : BMC Biotechnol. 2009; 9:91. URL : https://stacks.cdc.gov/view/cdc/3464 Wilkins, Elien E et al. (2009). Authentication scheme for routine verification of genetically similar laboratory colonies: a trial with Anopheles gambiae. 9 Wilkins, Elien E et al. "Authentication scheme for routine verification of genetically similar laboratory colonies: a trial with Anopheles gambiae" 9 (2009) Wilkins, Elien E et al. "Authentication scheme for routine verification of genetically similar laboratory colonies: a trial with Anopheles gambiae" vol. 9, 2009 Export RIS Citation Information.

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Wilkins, Elien E ;

Marcet, Paula L

Oct 22 2009 | BMC Biotechnol. 2009; 9:91.

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BackgroundWhen rearing morphologically indistinguishable laboratory strains concurrently, the threat of unintentional genetic contamination is constan...
Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows

CITE Title : Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows Personal Author(s) : Skums, Pavel;Mancuso, Nicholas;Artyomenko, Alexander;Tork, Bassam;Mandoiu, Ion;Khudyakov, Yury;Zelikovsky, Alex; Published Date : Jun 28 2013 Source : BMC Bioinformatics. 2013; 14(Suppl 9):S2. URL : https://stacks.cdc.gov/view/cdc/19489 Skums, Pavel et al. (2013). Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows. 14 Skums, Pavel et al. "Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows" 14 (2013) Skums, Pavel et al. "Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows" vol. 14, 2013 Export RIS Citation Information.

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Skums, Pavel ;

Mancuso, Nicholas

Jun 28 2013 | BMC Bioinformatics. 2013; 14(Suppl 9):S2.

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BackgroundHighly mutable RNA viruses exist in infected hosts as heterogeneous populations of genetically close variants known as quasispecies. Next-ge...
HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers

CITE Title : HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers Personal Author(s) : Zhu, Qiyun;Kosoy, Michael;Dittmar, Katharina; Published Date : Aug 26 2014 Source : BMC Genomics. 15(1). URL : https://stacks.cdc.gov/view/cdc/25290 Zhu, Qiyun et al. (2014). HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers. 15(1). Zhu, Qiyun and Kosoy, Michael and Dittmar, Katharina "HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers" 15, no. 1 (2014) Zhu, Qiyun et al. "HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers" vol. 15, no. 1, 2014 Export RIS Citation Information.

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Zhu, Qiyun ;

Kosoy, Michael

Aug 26 2014 | BMC Genomics. 15(1).

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BackgroundFirst pass methods based on BLAST match are commonly used as an initial step to separate the different phylogenetic histories of genes in mi...
Comparison of target labeling methods for use with Affymetrix GeneChips

CITE Title : Comparison of target labeling methods for use with Affymetrix GeneChips Personal Author(s) : Lonergan, William;Whistler, Toni;Vernon, Suzanne D; Published Date : May 18 2007 Source : BMC Biotechnol. 2007; 7:24. URL : https://stacks.cdc.gov/view/cdc/3463 Lonergan, William et al. (2007). Comparison of target labeling methods for use with Affymetrix GeneChips. 7 Lonergan, William and Whistler, Toni and Vernon, Suzanne D "Comparison of target labeling methods for use with Affymetrix GeneChips" 7 (2007) Lonergan, William et al. "Comparison of target labeling methods for use with Affymetrix GeneChips" vol. 7, 2007 Export RIS Citation Information.

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Lonergan, William ;

Whistler, Toni

May 18 2007 | BMC Biotechnol. 2007; 7:24.

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BackgroundSeveral different commercial one-cycle labeling kits are available for preparation of the target for use with the Affymetrix GeneChip platfo...