Automated Biosurveillance Data from England and Wales, 1991–2011
Published Date:Jan 2013
Source:Emerg Infect Dis. 19(1):35-42.
Colony Count, Microbial
Infectious Disease Outbreaks
Public Health Informatics
Public Health Surveillance
Reproducibility Of Results
Sensitivity And Specificity
Description:Outbreak detection systems for use with very large multiple surveillance databases must be suited both to the data available and to the requirements of full automation. To inform the development of more effective outbreak detection algorithms, we analyzed 20 years of data (1991-2011) from a large laboratory surveillance database used for outbreak detection in England and Wales. The data relate to 3,303 distinct types of infectious pathogens, with a frequency range spanning 6 orders of magnitude. Several hundred organism types were reported each week. We describe the diversity of seasonal patterns, trends, artifacts, and extra-Poisson variability to which an effective multiple laboratory-based outbreak detection system must adjust. We provide empirical information to guide the selection of simple statistical models for automated surveillance of multiple organisms, in the light of the key requirements of such outbreak detection systems, namely, robustness, flexibility, and sensitivity.
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