COPLA, a taxonomic classifier of plasmids [supporting dataset]

Bartomeus-Peñalver, Roger; de la Cruz, Fernando; Fernández-López, Raúl; Redondo-Salvo, Santiago; Tagg, Kaitlin A.; Vielva, Luis; Webb, Hattie E.

doi:10.6084/m9.figshare.15087622.v1

Advanced Search

Select up to three search categories and corresponding keywords using the fields to the right. Refer to the Help section for more detailed instructions.

Search our Collections & Repository

Advanced Search
Custom Query

All these words:

For very narrow results

This exact word or phrase:

When looking for a specific result

Any of these words:

Best used for discovery & interchangable words

None of these words:

Recommended to be used in conjunction with other fields

Language:

Dates

Publication Date Range:

to

Document Data

Title:

Document Type:

Library

Collection:

Series:

People

Author:

Clear All

Query Builder

Query box

Clear All

For additional assistance using the Custom Query please check out our Help Page

i

COPLA, a taxonomic classifier of plasmids [supporting dataset]

2021
See Associated Publication(s)
By Bartomeus-Peñalver, Roger ; de la Cruz, Fernando ; Fernández-López, Raúl ; ...

[BIN]

Select the Download button to view the document

This document file type cannot be previewed

English

Details Publications You May Also Like

Details:

Alternative Title:

figshare Academic Research System
Journal Article:

BMC Bioinformatics
Personal Author:

Bartomeus-Peñalver, Roger ; de la Cruz, Fernando ; Fernández-López, Raúl ; Redondo-Salvo, Santiago ; Tagg, Kaitlin A. ; ... More +

Bartomeus-Peñalver, Roger ; de la Cruz, Fernando ; Fernández-López, Raúl ; Redondo-Salvo, Santiago ; Tagg, Kaitlin A. ; Vielva, Luis ; Webb, Hattie E. Less -
Corporate Authors:

Centers for Disease Control and Prevention ; Departamento de Ingeniería de las Comunicaciones, Universidad de Cantabria ; Instituto de Biomedicina y Biotecnología de Cantabria (IBBTEC), Universidad de Cantabria-CSIC ; WDS, Inc.

Centers for Disease Control and Prevention ; Departamento de Ingeniería de las Comunicaciones, Universidad de Cantabria ; Instituto de Biomedicina y Biotecnología de Cantabria (IBBTEC), Universidad de Cantabria-CSIC ; WDS, Inc. Less -
Description:

Additional file 3. RefSeq200 plasmid dataset. A complete list of the plasmids from release 200 of the NCBI RefSeq Plasmid database. This dataset is the source of the plasmids used to evaluate COPLA performance: 23,209 rows in tabular form.
Content Notes:

Stacks:111608
Keywords:

[+]

60506 Virology 69999 Biological Sciences Not Elsewhere Classified 80699 Information Systems Not Elsewhere Classified 110309 Infectious Diseases Evolutionary Biology FOS: Biological Sciences FOS: Computer And Information Sciences FOS: Health Sciences Genetics Medicine Microbiology Space Science
DOI:

https://dx.doi.org/10.6084/m9.figshare.15087622.v1
Landing Page:

https://springernature.figshare.com/articles/dataset/Additional_file_3_of_COPLA_a_taxonomic_classifier_of_plasmids/15087622/1
Modified:

08/01/2021
Date Issued:

01/01/2021
Document Type:

Dataset
Funding:

Centers for Disease Control and Prevention(100000030:SCIVAL;200-2019-06679:NA;) ; Ministerio de Ciencia e Innovación(501100004837:SCIVAL;PID2020-117923GB-I00:NA;) ; Ministerio de Ciencia, Innovación y Universidades(BFU2017-86378-P:NA;100014440:SCIVAL;) ; Ministerio de Economía, Industria y Competitividad, Gobierno de España(501100010198:SCIVAL;DI-17-09164:NA;)

Centers for Disease Control and Prevention(100000030:SCIVAL;200-2019-06679:NA;) ; Ministerio de Ciencia e Innovación(501100004837:SCIVAL;PID2020-117923GB-I00:NA;) ; Ministerio de Ciencia, Innovación y Universidades(BFU2017-86378-P:NA;100014440:SCIVAL;) ; Ministerio de Economía, Industria y Competitividad, Gobierno de España(501100010198:SCIVAL;DI-17-09164:NA;) Less -
Collection(s):

Stephen B. Thacker CDC Library collection
Download URL:

https://stacks.cdc.gov/view/cdc/126745/cdc_126745_DS1.bin
File Type:

No Additional Files

More +

COPLA, a taxonomic classifier of plasmids

[PDF - 1.20 MB]

Personal Author:

Redondo-Salvo, Santiago ;

Bartomeus-Peñalver, Roger
...

7 31 2021 | BMC Bioinformatics. 22

Description:

BackgroundPlasmids are mobile genetic elements, key in the dissemination of antibiotic resistance, virulence determinants and other adaptive traits in...

File Type:

[PDF - 1.20 MB]

File Type:

[PDF - 1.20 MB]

COPLA, a taxonomic classifier of plasmids [supporting dataset]

Details:

Supporting Files

Publications

You May Also Like