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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" article-type="brief-report"><?properties open_access?><front><journal-meta><journal-id journal-id-type="nlm-ta">Emerg Infect Dis</journal-id><journal-id journal-id-type="iso-abbrev">Emerging Infect. Dis</journal-id><journal-id journal-id-type="publisher-id">EID</journal-id><journal-title-group><journal-title>Emerging Infectious Diseases</journal-title></journal-title-group><issn pub-type="ppub">1080-6040</issn><issn pub-type="epub">1080-6059</issn><publisher><publisher-name>Centers for Disease Control and Prevention</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="pmid">32315282</article-id><article-id pub-id-type="pmc">7392444</article-id><article-id pub-id-type="publisher-id">20-1096</article-id><article-id pub-id-type="doi">10.3201/eid2608.201096</article-id><article-categories><subj-group subj-group-type="second-type"><subject>Expedited</subject></subj-group><subj-group subj-group-type="heading"><subject>Research Letter</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Letter</subject></subj-group><subj-group subj-group-type="TOC-title"><subject>Estimation of Coronavirus Disease Case-Fatality Risk in Real Time</subject></subj-group></article-categories><title-group><article-title>Estimation of Coronavirus Disease Case-Fatality Risk in Real Time</article-title><alt-title alt-title-type="running-head">Estimation of Coronavirus Disease Case-Fatality Risk in Real Time</alt-title></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name><surname>Ge</surname><given-names>Yang</given-names></name></contrib><contrib contrib-type="author" corresp="yes"><name><surname>Sun</surname><given-names>Shengzhi</given-names></name></contrib><aff id="aff1">The University of Georgia, Athens, Georgia, USA (Y. Ge); </aff><aff id="aff2">Boston University School of Public Health, Boston, Massachusetts, USA (S. Sun)</aff></contrib-group><author-notes><corresp id="cor1">Address for correspondence: Yang Ge, Department of Epidemiology and Biostatistics, University of Georgia, 101 Buck Rd, Athens, GA 30602-7396, USA; email: <email xlink:href="yang.ge@uga.edu">yang.ge@uga.edu</email>; Shengzhi Sun, Department of Environmental Health, Boston University School of Public Health, 715 Albany St, Boston, MA 02118, USA; email: <email xlink:href="szsun@bu.edu">szsun@bu.edu</email></corresp></author-notes><pub-date pub-type="ppub"><month>8</month><year>2020</year></pub-date><volume>26</volume><issue>8</issue><fpage>1922</fpage><lpage>1923</lpage><abstract><p>We ran a simulation comparing 3 methods to calculate case-fatality risk for coronavirus disease using parameters described in previous studies. Case-fatality risk calculated from these methods all are biased at the early stage of the epidemic. When comparing real-time case-fatality risk, the current trajectory of the epidemic should be considered.</p></abstract><kwd-group kwd-group-type="author"><title>Keywords: </title><kwd>respiratory infections</kwd><kwd>severe acute respiratory syndrome coronavirus 2</kwd><kwd>SARS-CoV-2</kwd><kwd>SARS</kwd><kwd>COVID-19</kwd><kwd>2019 novel coronavirus disease</kwd><kwd>coronavirus disease</kwd><kwd>zoonoses</kwd><kwd>viruses</kwd><kwd>coronavirus</kwd></kwd-group></article-meta></front><body><p>We read with interest the research letter on estimating case-fatality risk for coronavirus disease (COVID-19) by Wilson, et al. (<xref rid="R1" ref-type="bibr"><italic>1</italic></xref>). In their analyses, the authors estimated the case-fatality risk adjusted to a fixed lag time to death. They acknowledged that the calculated adjusted case-fatality risk (aCFR) might be influenced by residual uncertainties from undiagnosed mild COVID-19 cases and a shortage of medical resources. However, we believe the time-varying number of cumulative cases and deaths also should be considered in the epidemic profile.</p><p>Because of the exponential growth curve of the COVID-19 outbreak, the numbers of cumulative cases and cumulative deaths have been relatively close to each other in the early stages of the outbreak, leading to a much higher aCFR. As the outbreak progresses, the ratio of the cumulative cases and deaths declines, which reduces the aCFR. Thus, a higher aCFR does not necessarily indicate increased disease severity.</p><p>To test our hypothesis, we performed a simulation study by using a susceptible-infectious-recovered&#x02013;death model and parameters set according to prior studies. We set the infectious period as 10 days (<xref rid="R2" ref-type="bibr"><italic>2</italic></xref>); case-fatality risk as 3% (<xref rid="R3" ref-type="bibr"><italic>3</italic></xref>); basic reproductive ratio (R<sub>0</sub>) as 2.5 (<italic>4</italic>); recovery rate as 1/13 day (<xref rid="R5" ref-type="bibr"><italic>5</italic></xref>), that is, 13 days from illness onset to recovery; and the population size as 1 million. We compared crude case-fatality risk, aCFR per Wilson et al.&#x02019;s method, and aCFR per Mizumoto et al.&#x02019;s method (<xref rid="R6" ref-type="bibr"><italic>6</italic></xref>). Although the case-fatality risk calculated from these methods all are biased at the early stage of the epidemic, case-fatality risk calculated from Mizumoto et al.&#x02019;s method was closer to the true case-fatality risk of 3% (<xref ref-type="fig" rid="F1">Figure</xref>).</p><fig id="F1" fig-type="figure" position="float"><label>Figure</label><caption><p>Progression of coronavirus disease outbreak and changes in the case-fatality risk by crude and adjusted rates. Crude case-fatality risk is the cumulative number of deaths on a given day divided by the cumulative number of cases on the same day. We set the infectious period as 10 days (<xref rid="R2" ref-type="bibr"><italic>2</italic></xref>); case-fatality risk as 3% (<xref rid="R3" ref-type="bibr"><italic>3</italic></xref>); basic reproductive ratio (R<sub>0</sub>) as 2.5 (<xref rid="R4" ref-type="bibr"><italic>4</italic></xref>); recovery rate as 1/13 day (<xref rid="R5" ref-type="bibr"><italic>5</italic></xref>), that is, 13 days from illness onset to recovery; and the population size as 1 million. A) Changes in the number of subpopulations over time after the first infection. B) Changes in crude case-fatality risk after 13th day of exposure and aCFR calculated by using Wilson et al.&#x02019;s method (<xref rid="R1" ref-type="bibr"><italic>1</italic></xref>) and by using Mizumoto et al.&#x02019;s method (<xref rid="R6" ref-type="bibr"><italic>6</italic></xref>). aCFR, adjusted case-fatality risk.</p></caption><graphic xlink:href="20-1096-F"/></fig><p>In conclusion, we recommend the Mizumoto et al. method (<xref rid="R6" ref-type="bibr"><italic>6</italic></xref>) to calculate aCFR in real time. When comparing real-time estimation of the case-fatality risk across countries and regions, our results indicate that the current trajectory of the epidemic should be considered, particularly if the epidemic is still in its early growth phase.</p></body><back><fn-group><fn fn-type="citation"><p><italic>Suggested citation for this article</italic>: Ge Y, Sun S. Estimation of coronavirus disease case-fatality risk in real time. Emerg Infect Dis. 2020 Aug [<italic>date cited</italic>]. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3201/eid2608.201096">https://doi.org/10.3201/eid2608.201096</ext-link></p></fn></fn-group><bio id="d38e195"><p>Mr. Ge is a PhD candidate in the Department of Epidemiology and Biostatistics at the University of Georgia, Athens, Georgia, USA. His research interests include infectious disease modeling and vaccine design. </p><p>Dr. Sun is a research scientist at the Boston University School of Public Health. His research focuses on estimating the impact of air pollution and climate change on human health.</p></bio><ref-list><title>References</title><ref id="R1"><label>1. </label><mixed-citation publication-type="journal"><string-name><surname>Wilson</surname>
<given-names>N</given-names></string-name>, <string-name><surname>Kvalsvig</surname>
<given-names>A</given-names></string-name>, <string-name><surname>Barnard</surname>
<given-names>LT</given-names></string-name>, <string-name><surname>Baker</surname>
<given-names>MG</given-names></string-name>. <article-title>Case-fatality risk estimates for COVID-19 calculated by using a lag time for fatality.</article-title>
<source>Emerg Infect Dis</source>. <year>2020</year>;<volume>26</volume>: <comment>Epub ahead of print</comment>. <pub-id pub-id-type="doi">10.3201/eid2606.200320</pub-id><pub-id pub-id-type="pmid">32168463</pub-id></mixed-citation></ref><ref id="R2"><label>2. </label><mixed-citation publication-type="journal"><string-name><surname>Guan</surname>
<given-names>W-J</given-names></string-name>, <string-name><surname>Ni</surname>
<given-names>Z-Y</given-names></string-name>, <string-name><surname>Hu</surname>
<given-names>Y</given-names></string-name>, <string-name><surname>Liang</surname>
<given-names>W-H</given-names></string-name>, <string-name><surname>Ou</surname>
<given-names>C-Q</given-names></string-name>, <string-name><surname>He</surname>
<given-names>J-X</given-names></string-name>, <etal>et al.</etal>; <collab>China Medical Treatment Expert Group for Covid-19</collab>. <article-title>Clinical characteristics of coronavirus disease 2019 in China.</article-title>
<source>N Engl J Med</source>. <year>2020</year>;<elocation-id>NEJMoa2002032</elocation-id>; <comment>Epub ahead of print</comment>. <pub-id pub-id-type="doi">10.1056/NEJMoa2002032</pub-id><pub-id pub-id-type="pmid">32109013</pub-id></mixed-citation></ref><ref id="R3"><label>3. </label><mixed-citation publication-type="journal"><collab>Novel Coronavirus Pneumonia Emergency Response Epidemiology Team</collab>. <article-title>[The epidemiological characteristics of an outbreak of 2019 novel coronavirus diseases (COVID-19) in China]</article-title>
<comment>[in Chinese]</comment>. <source>Zhonghua Liu Xing Bing Xue Za Zhi</source>. <year>2020</year>;<volume>41</volume>:<fpage>145</fpage>&#x02013;<lpage>51</lpage>.<pub-id pub-id-type="pmid">32064853</pub-id></mixed-citation></ref><ref id="R4"><label>4. </label><mixed-citation publication-type="journal"><string-name><surname>Li</surname>
<given-names>Q</given-names></string-name>, <string-name><surname>Guan</surname>
<given-names>X</given-names></string-name>, <string-name><surname>Wu</surname>
<given-names>P</given-names></string-name>, <string-name><surname>Wang</surname>
<given-names>X</given-names></string-name>, <string-name><surname>Zhou</surname>
<given-names>L</given-names></string-name>, <string-name><surname>Tong</surname>
<given-names>Y</given-names></string-name>, <etal>et al.</etal>
<article-title>Early transmission dynamics in Wuhan, China, of novel coronavirus&#x02013;infected pneumonia.</article-title>
<source>N Engl J Med</source>. <year>2020</year>;<volume>382</volume>:<fpage>1199</fpage>&#x02013;<lpage>207</lpage>; <comment>Epub ahead of print</comment>. <pub-id pub-id-type="doi">10.1056/NEJMoa2001316</pub-id><pub-id pub-id-type="pmid">31995857</pub-id></mixed-citation></ref><ref id="R5"><label>5. </label><mixed-citation publication-type="webpage"><collab>World Health Organization</collab>. Report of the WHO-China Joint Mission on Coronavirus Disease 2019 (COVID-19). <year>2020</year> Feb 24 [cited 2020 Mar 27]. <ext-link ext-link-type="uri" xlink:href="https://www.who.int/docs/default-source/coronaviruse/who-china-joint-mission-on-covid-19-final-report.pdf">https://www.who.int/docs/default- source/coronaviruse/who-china-joint- mission-on-covid-19-final-report.pdf</ext-link></mixed-citation></ref><ref id="R6"><label>6. </label><mixed-citation publication-type="journal"><string-name><surname>Mizumoto</surname>
<given-names>K</given-names></string-name>, <string-name><surname>Chowell</surname>
<given-names>G</given-names></string-name>. <article-title>Estimating risk for death from 2019 novel coronavirus disease, China, January&#x02013;February 2020.</article-title>
<source>Emerg Infect Dis</source>. <year>2020</year>;<volume>26</volume>: <comment>Epub ahead of print</comment>. <pub-id pub-id-type="doi">10.3201/eid2606.200233</pub-id><pub-id pub-id-type="pmid">32168464</pub-id></mixed-citation></ref></ref-list></back></article>