Conceived and designed the experiments: HCJ TJM JLNW GPP SW BS SD HH AP AWT. Performed the experiments: HCJ TJM AWT. Analyzed the data: HCJ TJM JLNW AWT. Contributed reagents/materials/analysis tools: GPP SW BS SD HH AP. Wrote the paper: HCJ TJM JLNW AWT. Obtained BPHS dataset: HCJ TJM. Designed questionnaire: HCJ TJM JLNW GPP SW BS SD HH AP AWT. Tested questionnaire: HCJ HH.
Current address: Garth Partnership, Straight Lane, Beeford, East Yorkshire, United Kingdom
A case-control investigation was undertaken to determine management and health related factors associated with pleurisy in slaughter pigs in England and Wales.
The British Pig Executive Pig Health Scheme database of abattoir pathology was used to identify 121 case (>10% prevalence of pleurisy on 3 or more assessment dates in the preceding 24 months) and 121 control units (≤5% prevalence of pleurisy on 3 or more assessment dates in the preceding 24 months). Farm data were collected by postal questionnaire. Data from respondents (70 cases and 51 controls) were analysed using simple logistic regression models with Bonferroni corrections. Limited multivariate analyses were also performed to check the robustness of the overall conclusions.
Management factors associated with increased odds of pleurisy included no all-in all-out pig flow (OR 9.3, 95% confidence interval [CI]: 3.3–29), rearing of pigs with an age difference of >1 month in the same airspace (OR 6.5 [2.8–17]) and repeated mixing (OR 2.2 [1.4–3.8]) or moving (OR 2.2 [1.5–3.4]) of pigs during the rearing phase. Those associated with decreased odds of pleurisy included filling wean-to-finish or grower-to-finish systems with piglets from ≤3 sources (OR 0.18 [0.07–0.41]) compared to farrow-to-finish systems, cleaning and disinfecting of grower (ORs 0.28 [0.13–0.61] and 0.29 [0.13–0.61]) and finisher (ORs 0.24 [0.11–0.51] and 0.2 [0.09–0.44]) accommodation between groups, and extended down time of grower and finisher accommodation (OR 0.84 [0.75–0.93] and 0.86 [0.77–0.94] respectively for each additional day of downtime). This study demonstrated the value of national-level abattoir pathology data collection systems for case control analyses and generated guidance for on-farm interventions to help reduce the prevalence of pleurisy in slaughter pigs.
Pleurisy is defined as inflammation of the pleural membranes, the serosal surfaces of the lung and chest cavity that facilitates smooth inflation of the lung. It is a particular problem in the pig industry
Pleurisy is a common finding in slaughter pigs in the UK, as evidenced by data from the systematic abattoir pathology recording under the British Pig Executive's (BPEX) Pig Health Scheme (BPHS); data provided to us from 14 abattoirs showed that of 15,237 slaughter consignments between July 2005 and October 2008, 80% were affected by pleurisy. Within these consignments, at the individual pig level 12.5% of 641,763 pigs were affected. Studies in other countries have found similar and even increasing pleurisy prevalence over the last 20 years (
| Country | Period | Prevalence |
| Belgium | 2000 | 16% |
| 2009 | 20.8% | |
| Denmark | 1987 | 14 |
| 1998 | 24% | |
| 2000 | 25% | |
| Netherlands | 1990 | 12% |
| 2004 | 22.5% | |
| Norway | 1991 | 41% |
| Spain | 2009 | 26.8% |
| UK | 1988 | 16% |
Previous studies of management factors associated with pleurisy in pigs have identified some common management factors, as well as some regional differences. The most important risk factors found in previous studies were related to transmission of infections at herd or pig level such as pig density in neighbourhood
The presence of antibodies to
Understanding the health associated factors and clinical signs in live pigs with pleurisy would permit more effective and timely targeting of control measures, since often the disease is only apparent at slaughter. However, work in this area has been limited—coughing and lethargy are considered to be indicative, but not specific for pleurisy, but attempts to identify pigs suffering from pleurisy pre-mortem based on pyrexia and dyspnoea have not been successful
The present analysis focused on management and health-related associative factors for pleurisy and took into account the three main types of slaughter pig production systems relevant in the European Union (farrow-to-finish, wean-to-finish, grow-to-finish). Most previous studies looked at only one
The British Pig Executive (BPEX), representing English and Welsh levy paying pig producers, launched the BPHS abattoir pathology monitoring scheme database in 2005
Criteria for case and control definitions were developed from this pre-existing database, taking into account the distribution of the data, and aiming to avoid data collected from small sample populations or from producers that recorded highly variable pleurisy prevalence over time. The database was used to identify all producers that had 50 slaughter pigs assessed on at least three occasions in the 24 months prior to October 2008 (778 (56%) producers of a total of approximately 1400 commercial herds) (
| Herds (cases and controls) | Number (%) |
| Commercial slaughter-pig holdings in England and Wales | 1400 (100%) |
| Herds sampled by BPHS scheme (data for 2010) | 1036 (74% of 1400) |
| Herds with 50 pigs sampled by BPHS on at least 3 occasions prior to October 2008 | 778 (56% of 1400) |
| Number of eligible cases | 121(16% of 778) |
| Number of eligible controls | 306 (39% of 778) |
| Total number of eligible herds | 427 herds (55% of 778; 31% of 1400) |
| Number of dispatched questionnaires | 242 (121 cases, 121 controls) |
| Number of completed questionnaires | 121 (50% of 242; 16% of 778; 9% of 1400) |
| 51 cases (7% of 778) | |
| 70 controls (9% of 778) | |
| Number of herds included in univariable model | 121 |
| Number of herds included in multivariable model | 121 |
The number (%) of herds at each level of the sampling strategy, including the number of eligible case and control herds, as a proportion of the total number of commercial slaughter-pig herds in England and Wales.
Herd health and management data were gathered by a closed-question postal questionnaire sent to 242 units (121 cases, 121 controls) followed up by telephone liaison with the farm manager and the appropriate private veterinarian. Respondents were not informed of their case/control categorisation in order to minimise selection bias. A pilot questionnaire was validated at three units before dispatch. The questions were composed to ensure clarity for producers and sufficient detail for statistical analysis. An outline of investigated variable factors is presented in
| Variable | Levels (if applicable) |
| Production unit type (and number of sources where applicable) | Farrow-finish/wean-finish/grow-finish |
| All-in/All-out pig flow | By unit/ building/room/pen |
| Number of finisher places | value |
| Distance to next pig unit (km) | value |
| Experience of senior stockman (years) | value |
| Ongoing training of stockmen | Yes/No |
| Accommodation systems (for weaning −30 kg, and 30 kg – slaughter) | Fully slatted/part slatted/straw yards/assisted ventilation |
| Number of times pigs moved after weaning | value |
| Number of times pigs mixed after weaning | value |
| Is airspace shared by pigs of >1 month age gap? | Yes/no |
| Maximum number of pigs in shared airspace | value |
| Feeding regime (for 7–30 kg, for 30–50 kg, and for 50 kg – slaughter) | Meal/pellets/wet feed |
| Home-mixed/purchased compound/by-product | |
| Ad libitum/restrict fed | |
| Medication: number at group level | Product/duration/in feed or water/reason |
| Medication: individual treatments: | Number in past week/reason |
| Farmer observations of disease (main effect: none, few, many; where an age effect requested this is 7–30 kg & >30 kg; data requested for 2008 & 2007) | Scours (by age)/sneezing (by age)/coughing (by age)/dyspnoea (by age)/meningitis/wasting (by age)/sudden deaths (by age)/porcine dermatitis and nephropathy syndrome (PDNS)/other |
| Farmer or herd vet knowledge of specific disease status (believed present, confirmed by vet, believed absent, not known) | porcine reproductive and respiratory syndrome (PRRS))/A. pleuropneumoniae (APP)/Glasser's Disease/enzootic pneumonia (EP)/post-weaning multisystemic wasting syndrome (PMWS) |
| Vaccination of finisher pigs | Absence of any vaccination/EP (one or 2 dose regime)/Porcine circovirus type 2 (PCV2)/PRRS/Glasser's Disease/Ileitis/Other |
| Post-weaning mortality | Values for 2008, 2007, 2006 |
| Mortality recording system type | Computer/other |
| Vet health plan in place on unit | Yes/No |
Outline of variables included in a questionnaire addressed to pig farms defined as case (pleurisy prevalence consistently >10%) or control (pleurisy prevalence consistently <5%) to seek relationships between pleurisy and production unit type, key indicators of general management, and health observations.
Data were stored and manipulated in Microsoft Access and Excel (Microsoft 2007). All statistical analyses were conducted in the R statistical language (R Core Development Team 2008).
The questionnaire was stratified into a series of categories, representing different characteristics of a unit. These were: general farm information (including production type), mortality and productivity, health status, herd environment and herd management. To explore the data in a systematic manner we stratified the variables into two main groups: those that corresponded to farm management characteristics (for which the influence is possibly independent of the disease status), and disease associated factors (those factors that were directly dependent on the disease status of the farm).
It was necessary to re-categorise some of the categorical variables to ensure that there were >5 observations in any level of the factor and also to aid interpretation. Variables having large numbers of missing values (>60) were removed at the outset, as were those categorical variables that had <5 samples in a group and could not be easily re-categorised. Within each group of variables (e.g. management characteristics and disease associated characteristics) the data were screened by applying a simple logistic regression model to each variable in turn, using a chi-squared likelihood ratio test (LRT)
Overall there were 126 respondent farms from the original 242 targeted: 51 cases, 70 controls, with 2 questionnaires unusable due to incorrect herd identification. Three had ceased business. Hence the overall usable response rate was 50%. The mean, minimum and maximum pleurisy prevalences across case producers were 29.5%, 12% and 76.7%. Across control producers the mean pleurisy prevalence was 1.6%, ranging from a minimum of 0% to a maximum of 3.3%.
The univariable results for management related risk factor analysis are shown in
| Variable | Adj. LRTp-value | n | Type | Levels | OR | Lower95% CI | Upper95% CI |
| Herd management | 0.00 | 117 | - | AIAO | - | - | - |
| - | By room | 0.96 | 0.05 | 7.2 | |||
| - | Mixed | 8.2 | 3.0 | 24 | |||
| - | None | 9.3 | 3.3 | 29 | |||
| Shared air | 0.00 | 121 | - | False | - | - | - |
| - | True | 6.5 | 2.8 | 17 | |||
| Number moves (per move) | 0.00 | 119 | - | - | 2.2 | 1.5 | 3.4 |
| Production type | 0.00 | 121 | - | Farrow-to-finish | - | - | - |
| - | Wean-to-finish | 0.10 | 0.03 | 0.28 | |||
| - | Grow-to-finish | 0.45 | 0.18 | 1.1 | |||
| Disinfect between batches | 0.00 | 121 | Finisher | False | - | - | - |
| True | 0.20 | 0.09 | 0.44 | ||||
| Downtime (per add. day) | 0.00 | 81 | Grower | - | 0.84 | 0.75 | 0.93 |
| Partial slatted | 0.01 | 80 | Weaner | False | - | - | - |
| True | 21 | 3.7 | 400 | ||||
| Number source units | 0.01 | 116 | - | 0 | - | - | - |
| - | < = 3 | 0.18 | 0.07 | 0.41 | |||
| - | >3 | 0.69 | 0.13 | 4.0 | |||
| Clean between batches | 0.01 | 121 | Finisher | False | - | - | - |
| True | 0.24 | 0.11 | 0.51 | ||||
| Downtime (per add. day) | 0.01 | 83 | Finisher | - | 0.86 | 0.77 | 0.94 |
| Feed origin | 0.02 | 104 | Grower | Homemix | - | - | - |
| Purchased | 0.22 | 0.09 | 0.52 | ||||
| Number mixes (per mix) | 0.03 | 120 | - | - | 2.2 | 1.4 | 3.8 |
| Disinfect between batches | 0.04 | 121 | Grower | False | - | - | - |
| True | 0.29 | 0.13 | 0.61 | ||||
| Clean between batches | 0.04 | 121 | Grower | False | - | - | - |
| True | 0.28 | 0.13 | 0.61 |
Results of independent logistic regression models fitted to each management variable in turn, showing odds ratios (OR) and 95% confidence intervals for the variables shown to be statistically significant at the 5% level from univariable logistic regression models using likelihood ratio tests (LRT) with Bonferroni adjustments. Continuous and discrete variables are shown with a dash in the “Levels” column, with the OR corresponding to the OR per unit increase; for the categorical variables the OR is relative to the referent level, which is always shown first.
Factors associated with reduced prevalence of pleurisy included wean-to-finish and grow-to-finish production systems compared to farrow-to-finish systems (OR 0.10 and 0.45 respectively), cleaning and disinfection on finishing batches (ORs 0.24 and 0.20 for cleaning and disinfecting respectively), and on grower batches (ORs 0.28 and 0.29 respectively). Also associated was purchasing feed for growers as compared to home-mixing of feed (OR 0.22). Farrow-to-finish production was associated with higher levels of pleurisy than multisite operations that sourced pigs from other breeding units. However, the protective effect became less strong (and statistically insignificant) when these grow-outs sourced from >3 units (ORs 0.18 for ≤3 sources compared to 0.69 for >3 sources). Finally, longer periods of downtime between grower and finisher batches were associated with reduced pleurisy prevalence (ORs 0.84 and 0.86 for each additional day of downtime respectively).
Due to the stratified nature of some of the variables (e.g. grow-to-finish units do not have weaner accommodation), and the within-unit heterogeneity (particularly with regards to some of the accommodation types), it was difficult to design a sensible multivariable model that included all of the variables, such that there were sufficient samples to produce reasonable statistical power. Instead, we restricted attention to some of the more important variables identified in
| Variable | Type | Level | OR | Lower 95% CI | Upper 95% CI |
| Clean between batches | Grower | False | - | - | - |
| True | 0.33 | 0.11 | 0.89 | ||
| Number of moves (per move) | - | - | 2.3 | 1.5 | 3.8 |
| Shared air | - | False | - | - | - |
| - | True | 4.0 | 1.4 | 12 |
Results from a constrained multiple regression model fitted to ten variables across 110 batches to further investigate the relationship between management factors and pleurisy in slaughter pigs. Continuous (or discrete) variables are shown with a dash in the “Levels” column, with the OR corresponding to the OR per unit increase; for the categorical variables the OR is relative to the referent level, which is always shown first.
Interestingly, the strongest variable from the univariable analysis (herd management) was the first to be added, and remained in the model until the final step, where it seems that the combination of cleaning between batches (growers), air-space shared by multiple age groups, and number of moves rendered herd management unnecessary to remain in the model. There was a strong association between shared air and herd management (only 2/30 herds with shared air = true practiced AIAO, compared to 57/80 herds with shared air = false), and also between the number of moves and herd management (median of 1 move for AIAO systems and 3 moves for non-AIAO systems). The association with cleaning between batches and herd management was less pronounced. This final model showed no statistically significant lack-of-fit (p = 0.15) and showed a relatively good discriminatory power (AUC = 0.83). Overall, three observations had an absolute standardised Pearson residual of >2 and <2.5, and three more of >2.5. Removing these in turn made negligible difference to the parameter estimates.
Case units had an increased post-weaning mortality, dyspnoea (both<30 kg and >30 kg in weight), coughing (>30 kg) and increased odds of farmer declared positive status for APP. Also, increased frequency of group medication was associated with pleurisy (
| Variable | Adj. LRT p-value | n | Levels | OR | Lower 95% CI | Upper 95% CI |
| Mortality 2007 | 0.00 | 117 | - | 1.5 | 1.3 | 1.9 |
| APP( farmer or vet declared) | 0.00 | 92 | Absent | - | - | - |
| Present | 8.8 | 3.4 | 25 | |||
| Mortality 2008 | 0.00 | 114 | - | 1.3 | 1.1 | 1.6 |
| Mortality 2006 | 0.00 | 111 | - | 1.3 | 1.1 | 1.5 |
| Dyspnoea (>30 kg) 2007 | 0.00 | 121 | Absent | - | - | - |
| Present | 4.8 | 2.2 | 11 | |||
| Dyspnoea (>30 kg) 2008 | 0.01 | 121 | Absent | - | - | - |
| Present | 4.1 | 1.9 | 9.0 | |||
| Cough (>30 kg) 2007 | 0.03 | 121 | Absent | - | - | - |
| Present | 4.4 | 1.8 | 12 | |||
| Number of group medications | 0.04 | 117 | 0 | - | - | - |
| 1–2 | 3.6 | 1.5 | 10 | |||
| > = 3 | 9.6 | 2.7 | 40 | |||
| Cough (>30 kg) 2008 | 0.05 | 121 | Absent | - | - | - |
| Present | 4.0 | 1.7 | 10.4 | |||
| Dyspnoea (<30 kg) 2007 | 0.05 | 80 | Absent | - | - | - |
| Present | 4.9 | 1.9 | 14 |
Results of independent logistic regression models fitted to each disease associated variable in turn, showing odds ratios (OR) and 95% confidence intervals for the variables shown to be statistically significant at the 5% level from likelihood ratio tests (p-value) with Bonferroni adjustments. Continuous (or discrete) variables are shown with a dash in the “Levels” column, with the OR corresponding to the OR per unit increase; for the categorical variables the OR is relative to the referent level, which is always shown first.
The median post-weaning mortality rate between 2006 and 2008 (
The BPHS database, which represents approximately 74% of slaughter pig production in England and Wales, proved suitable for the purpose of identifying case and control units. However, many units within it had a large variation in pleurisy prevalence over the 24 month period studied. Because of this we imposed a strict definition of
Within responding units there were varying degrees of missing data. This was partly to do with unforeseen heterogeneity in management practices. For example, many units used multiple accommodation types, sometimes for different age groups. These relationships were not clear before the study, but meant that it was difficult to stratify these variables in a sensible manner without incorporating missing information (e.g. stratifying accommodation by age group meant that grow-to-finish units would have missing values for weaning-age variables). Furthermore, there was also a tendency for respondents not to complete all questions. These limitations emphasise the importance of designing data capture questionnaires in a way that maximises the collection of relevant data but minimises the potential for missing data.
Since the definition of cases and controls was determined before recruitment, and the classification was unknown to the respondent, this should reduce the impact of selection bias. Nonetheless, more control farms replied than cases (59% and 41% respectively). We were unable to identify any systematic bias in terms of explanatory variables since we had no data from non-responders. However, the differing response rates suggest that there may be a relationship between producers' ‘attitudes’ to communication about this on-farm health issue and the prevalence of pleurisy. Similar future studies should take account of these differing response rates and factor in the need for follow-up phone calls to responders. Finally, the analysis only included units that had 50 pigs assessed (i.e. 100 or more pigs submitted) on each of 3 successive occasions and, although this means that the results might not extrapolate to small-scale producers, it nevertheless provides information about farm management and health characteristics that are associated with consistently high or low levels of pleurisy in larger, more economically significant, units.
We used a series of univariable logistic regression models using a conservative Bonferroni step-down multiple adjustment procedure
The results of univariable analysis indicated that failure to implement strict AIAO (by unit or building) was strongly associated with increased pleurisy and this was in line with previous studies
Conversely, implementing AIAO by room, as opposed to by building or unit, was associated with increased pleurisy in the univariable analysis. It seems that there is sometimes confusion about the definition of AIAO – a management system that segregates pigs of a defined age span (e.g. 3 weeks) in an airspace that is separate from groups of other aged pigs throughout their life. A key part of AIAO is that the segregated airspace or accommodation is fully emptied before repopulation occurs. AIAO can break disease cycles, but only if the entire population is included in the process. Our data suggested that AIAO by room cannot be regarded as effective AIAO. In most cases, although the situation varies from farm to farm, a room is not separated enough from other pigs to allow calling the process of emptying a room ‘all-out’ or filling a room ‘all-in’.
The odds of pleurisy increased each time pigs were mixed (univariable analysis) or moved (univariable and multivariable models). Moving and mixing are stressors for pigs which may impact on immunity
A number of previously undescribed protective factors were identified in this analysis. Firstly, cleaning and disinfection of grower and finisher accommodation between batches was identified in the univariable model, with cleaning of grower pens remaining in the final multivariable model. Secondly, increased “down time” between batches for finisher and grower accommodation was identified in the univariable model. These are issues that have previously been identified as important associative factors relating to enteric disease
Compared to farrow-to-finish (FF) operations, grow-to-finish (GF) but especially wean-to-finish (WF) systems showed lower levels of pleurisy (GF OR = 0.45; WF OR = 0.1) according to the univariable analysis. The continuous presence of breeding and growing pigs on FF units may be responsible for continuous circulation of infections. Strict AIAO production, at building level, on FF units in the UK is extremely unlikely to occur and pigs must progress through what is often a closely located set of buildings. On the other hand, WF and GF units are more suited to strict AIAO, in spite of the fact that their population usually involves the mixing of pigs from different breeding sources. The observed additional protective effect of WF units over GF units is worthy of further investigation. Of potential importance might be the residual colostrally derived passive immunity at mixing during population in WF units. Population (and mixing of sources) on GF units takes place after the decline of passive immunity with, potentially, a consequential increase in the effective population of susceptible pigs. Also, or alternatively, if infections causing pleurisy spread soon after mixing on AIAO WF units, pigs have a longer period until slaughter during which lesions may resolve.
Another apparently protective factor identified in the univariable analysis was sourcing of piglets to WF or GF sites from ≤3 units in comparison to the single sourcing associated with farrow-finish (no external sources). This association was weaker when a batch was sourced from >3 breeding units. The protective effect over FF may be in part a proxy for the management conditions of WF and GF farms, although the reduced protective effect when more than 3 sources are taken is consistent with the notion that an increase in the likelihood of introduction of disease occurs when sourcing piglets from higher numbers of different units. The use of purchased grower feed versus home mixed feed was found to be associated with lower prevalence of pleurisy (OR = 0.2) but the absence of associations relating to feed at the finisher or weaner stages suggests that this finding may be an artefact, or may be correlated to other factors such as production type (home mixing is more common on FF units in the UK) but this could not be ascertained in the current project.
Regarding associations between pleurisy prevalence and disease related factors, the univariable study differentiated clinical signs by age group (< and >30 kg) and year (2007 and 2008). Similar to previous studies where observable respiratory disease in late finishing was associated with the presence of pleurisy
Increased mortality was consistently and strongly associated with the units being defined as cases in each of the 3 years for which data was requested. This basis of this association is worthy of further investigation because, on one hand, it is another indication that pleurisy is a disease of generally lower health status units and, on the other, an indication of the economic consequences of pleurisy on units where it is a consistent problem. As a proxy for the overall health of a unit, increased numbers of group level medication periods in the post-weaning period were associated with units with consistent pleurisy. While this observation would be consistent with a tendency for pleurisy to occur on units of generally lower health status and with higher consequent production costs, it is probable that some of these additional medications would have been a direct consequence of pleurisy.
In conclusion, this study identified management and health related factors associated with pleurisy based on a questionnaire across 121 respondent units producing slaughter pigs and a national abattoir pathology surveillance database – demonstrating the value of this national disease surveillance system. The identified factors were mostly related to transmission of infectious diseases and the analyses highlighted the importance of AIAO but also a group of management factors associated with it. In addition, farrow-finish management systems were shown to be particularly at risk of consistent pleurisy, in part likely due to the difficulty in implementing strict AIAO in these systems in the UK. Since implementation of complete AIAO management, for example at the building or unit level, has significant cost implications a better understanding of the relative importance of specific management factors that contribute to AIAO and which can be implemented in any production system, is of value to the industry.
The authors thank Dr Barbara Wieland and Dr Pablo Alarcon Lopez, both of the Royal Veterinary College, UK, for their assistance with design and review of the postal questionnaire and the sharing of relevant data.