We conducted a baseline study of human papillomavirus (HPV) type prevalence in invasive cervical cancers (ICC) using data from seven cancer registries (CR) in the US. Cases were diagnosed between 1994 and 2005, before the implementation of the HPV vaccines.
CRs from Florida, Kentucky, Louisiana, Michigan, Hawaii, Iowa and Los Angeles, California identified eligible ICC cases, and obtained sections from representative blocks of archived tumor specimens for DNA extraction. All extracts were assayed by Linear Array and if inadequate or HPV negative, re-tested with INNO-LiPA Genotype test. Clinical and demographic factors were obtained from the CRs and merged with the HPV typing data to analyze factors associated with different types and with HPV negativity.
A total of 777 ICCs were included in this analysis, with broad geographic, age and race distribution. Overall, HPV was detected in 91% of cases, including 51% HPV16, 16% HPV18 (HPV16 negative), and 24% other oncogenic and rare types. After HPV16 and 18, the most common types were 45, 33, 31, 35 and 52. Older age and non-squamous histology were associated with HPV negative typing.
This study provides baseline pre-vaccine HPV types for post-vaccine ICC surveillance in the future. HPV16 and/or 18 were found in 67% of ICCs, indicating the potential for vaccines to prevent a significant number of cervical cancers.
Invasive cervical cancer (ICC) is the third most common cancer among females worldwide, with an estimated 530,000 new cases in 2008.
Human papillomavirus (HPV) is an established risk factor for developing ICC.
There are currently two HPV vaccines available which protect against HPV16 and 18, targeted for girls before the onset of sexual activity (and HPV exposure), with catch-up vaccine approved to age 26.
The burden of HPV-associated cancers in the US was recently assessed using 1998–2003 data from NPCR and the SEER Program, providing baseline rates and geographic distribution of ICC in the US in the pre-vaccine era.
NPCR registries in Kentucky, Louisiana, Michigan and Florida (Kentucky, Louisiana and Detroit, MI are also part of the SEER Program) requested stored tissue samples from a simple random statewide sample of women diagnosed with ICC during 2004–2005. For Florida, the sample included three counties in the southeast part of the state (Palm Beach, Broward, Miami-Dade). Three SEER residual tissue repositories (RTR) that store tissue specimens that would otherwise be discarded, submitted samples from ICC cases: Los Angeles County, California, 1994–1999; Iowa statewide, 1994–1999; Hawaii statewide, 2000–2004.
All participating registries followed the same protocol for identifying and submitting the formalin-fixed paraffin-embedded (FFPE) tissue samples. Eligible cases had to be state residents of the participating registry and have a histologically-confirmed ICC (ICD-O-3 site codes C53.0, C53.1, C53.8, C53.9 and behavior code 3) diagnosed during the study years described above. Study coordinators in Kentucky, Louisiana, Michigan and Florida requested participation of hospitals and pathology laboratories where tissue blocks for eligible cases were stored. The criteria for selection of a representative diagnostic block from each case included the highest ratio of viable tumor to normal tissue and the best preservation (favoring use of biopsy rather than resection specimen). Participating laboratories prepared the samples according to the study protocol. In some cases, a central laboratory prepared the samples, and then the paraffin tissue blocks were returned to the donating facility. For the SEER RTRs, a laboratory at each site prepared the tissue samples. Materials for submitting and shipping the specimens were provided by CDC, and specimens were sent directly to the CDC for analysis. Selected demographic and clinical data from each registry were linked with HPV typing results to form a complete record.
CDC received IRB approval for the study, and each participating registry completed an IRB review with its own institution. In addition, some hospitals and pathology laboratories required an IRB review before participating.
Blocks were cut using precautions to prevent polymerase chain reaction (PCR) contamination between cases, including single-use disposable microtome blades, cleaning microtome between samples, and direct transfer of sections for PCR from microtome to sterile tubes using clean single-use applicator. The first and last sections were stained with Hematoxylin and Eosin (H&E). Intervening sections were transferred into 2 ml conical screw cap tubes with tether cap, one 10-micron section or two 5-mciron sections per tube (Simport, Beloeil, Canada).
H&E sections were reviewed by a study pathologist to confirm that tumor was present. Samples that did not have representative material were not processed. For confirmed samples, DNA was extracted with the Chemagic Viral NA/gDNA Kit special (chemagen USA, Worcester MA) as previously described.
All DNA extracts were tested with the Linear Array HPV Genotyping Test (LA, Roche Diagnostics, Indianapolis, IN). The test was performed according to the manufacturer’s protocol except for a template volume of 10 µl in the PCR reaction and the use of Beeblot instrument (Bee Robotics, Caernarfon, UK) for automated hybridization and washing of the reverse line blot. The LA detects 37 HPV types (6, 11, 16, 18, 26, 31, 33, 35, 39, 40, 42, 45, 51, XR(52), 53, 54, 55, 56, 58, 59, 61, 62, 64, 66, 67, 68, 69, 70, 71, 72, 73, 81, 82, 83, 84, 89, IS39). Samples positive for the XR probe that were also positive for HPV33, 35 and 58 required further evaluation to confirm or exclude the presence of HPV52. An HPV52 quantitative PCR assay was used to determine the status of HPV52 in these cases.
Samples with negative or inadequate LA results were re-tested with the INNO-LiPA HPV Genotyping Assay (LiPA, Innogenetics, Gent, Belgium) following the manufacturer’s specifications. LiPA detects 29 HPV types (6, 11, 16, 18, 26, 31, 33, 35, 39, 40, 43, 44, 45, 51, 52, 53, 54, 56, 58, 59, 66, 68, 69, 70, 71, 73, 74, 81, 82). Samples failing both assays were considered inadequate and excluded from analysis (N=9). H&E slides of negative samples were reviewed to see if sampling or preservation could have contributed to false negative results.
The descriptive analysis presented here includes tabulation of HPV typing results by registry, race, age, histology, stage, grade, and urban/rural residence, and distribution of HPV types alone and in combinations. Statistical analysis was conducted using Stata 10 software.
We used the hierarchical categories for HPV types as suggested by Wheeler et al.
Tissue samples for 786 cases of ICC were eligible for testing, 777 of which (98.9%) were adequate for evaluation. Selected demographic variables are presented by registry in
Overall, HPV16 was detected in 51% of cases, followed by HPV18 (with HPV16 negative) which was detected in 16% of the cases (
Negative results for oncogenic HPV types were more common among women who were older and non-Hispanic white, and among tumors that were adenocarcinomas, and cancers that were more advanced stage and grade. When all these variables were included in a logistic model, only age and histology were found to be statistically significant independent predictors: older women were more likely than younger to have HPV negative results (OR=3.2 for 50–69 and OR=5.8 for 70+, compared with 40–49 years old); and adenocarcinomas (OR=5.1) and “all others” (OR=6.3) were more likely to be HPV negative than squamous tumors.
The H&E slides of the 73 samples with negative results were reviewed to see if sampling or preservation could have contributed to false negative results. Only seven were limited by extremely small foci of tumor (9.6%) and all appeared to be adequately preserved. Nearly 60% were adeno- or adenosquamous carcinomas that could not be distinguished histologically from endometrial cancers.
HPV types (single and combinations) by the hierarchical categories are shown in
In our registry-based study including seven geographical regions of the US, 67% of ICC were positive for HPV16 and/or 18, and 24% for other types. This is generally in agreement with other studies and meta-analyses that have found that about 70% of cervical cancers can be attributed to HPV16 and 18.
Our results are also consistent with a joint analysis of two recent multi-center studies in Europe, which included 17 countries and about 2,900 cases of ICC.
Although it has been accepted that HPV is a necessary factor in the causal pathway to ICC,
With respect to the reach of the current vaccines, our results suggest that 67% of the cases could potentially be covered, as they were positive for HPV16 and/or 18 either alone or in combination with other types. A nonavalent vaccine is being developed which will cover HPV31, 33, 45, 52 and 58 in addition to HPV16, 18, 6 and 11. Based on the distribution of HPV types in our study, the coverage of such a vaccine would increase another 18%.
This study demonstrates the effectiveness of using a registry-based approach to sample and determine HPV type distribution in cervical cancer. The strength of this approach is that the data for the submitted cases were very complete except for stage, and seven different regions of the US were included. Not all cases could be included as not all facilities agreed to participate and some tissue blocks could not be located or did not have an adequate sample. Another limitation was the restriction in lifestyle or behavioral variables available in the data routinely and uniformly collected by the cancer registries, such as smoking, co-morbidities, number of sexual partners and other risky health factors that would allow a more comprehensive characterization of the factors associated with the different HPV types.
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The authors declare that they have no conflicts of interest.
We gratefully acknowledge the contributions from the participating hospitals and laboratories, and the other members of the HPV Typing Workgroup, as well as Sean Altekreuse at the National Cancer Institute.
This project was supported in part by the Centers for Disease Control and Prevention (CDC) grants NO. 5U58DP000810-5 (Kentucky), 5U58DP000844-5 (Florida), 5U58DP000812-5 (Michigan), and 5U58DP000769-5 (Louisiana) and from the SEER Program, National Institutes of Health, Department of Health and Human Services, under Contracts N01-PC-35139 (Los Angeles), N01-PC-35143 (Iowa) and N01-PC-35137 (Hawaii). Support for collection of specimens from Kentucky, Florida, Michigan and Louisiana, coordination of genotyping data from both SEER and NPCR registries, and genotyping was largely supported by CDC intramural funds and Vaccine for Children Funds.
Data collection from California was largely supported by the California Department of Health Services as part of the statewide cancer reporting program mandated by California Health and Safety Code Section 103885; by the National Cancer Institute, National Institutes of Health, Department of Health and Human Services under Contract N01-PC-2010-00035; and grant number 1U58DP000807-3 from the CDC.
The findings and conclusions in this report are those of the authors and do not necessarily represent the official position of the Centers for Disease Control and Prevention.
Demographics and HPV types for invasive cervical cancer cases by cancer registry
| Los | Hawaii | Iowa | Kentucky | Florida | Louisiana | Michigan | TOTAL | |
|---|---|---|---|---|---|---|---|---|
| Number of cases contributed | 70 | 116 | 66 | 159 | 169 | 93 | 104 | 777 |
| Race | ||||||||
| White, non-Hispanic | 20 (28.6) | 19 (16.3) | 59 (89.4) | 135 (84.9) | 51 (30.2) | 45 (48.4) | 80 (76.9) | 409 (52.6) |
| Black, non-Hispanic | 4 (5.7) | 1 (0.9) | 4 (6.1) | 21 (13.2) | 43 (25.4) | 43 (46.2) | 13 (12.5) | 129 (16.6) |
| Hispanic | 38 (54.3) | 1 (0.9) | 0 (0.0) | 2 (1.3) | 73 (43.2) | 2 (2.2) | 8 (7.7) | 124 (16.0) |
| Asian, Pacific Islander | 7 (10.0) | 79 (68.1) | 3 (4.5) | 0 (0.0) | 0 (0.0) | 3 (3.2) | 1 (1.0) | 93 (12.0) |
| All other or unknown | 1 (1.4) | 16 (13.8) | 0 (0.0) | 1 (0.6) | 2 (1.2) | 0 (0.0) | 2 (1.9) | 22 (2.8) |
| Age | ||||||||
| <30 | 4 (5.7) | 10 (8.6) | 5 (7.5) | 7 (4.4) | 9 (5.3) | 6 (6.5) | 4(3.9) | 45 (5.8) |
| 30–39 | 20 (28.6) | 20 (17.2) | 27 (40.9) | 19 (11.9) | 39 (23.1) | 23 (24.7) | 35 (33.6) | 183 (23.5) |
| 40–49 | 14 (20.0) | 35 (30.2) | 10 (15.2) | 51 (32.1) | 47 (27.8) | 23 (24.7) | 24 (23.1) | 204 (26.3) |
| 50–69 | 21 (30.0) | 32 (27.6) | 14 (21.2) | 59 (37.1) | 49 (29.0) | 26 (28.0) | 29 (27.9) | 230 (29.6) |
| 70+ | 11 (15.7) | 19 (16.4) | 10 (15.2) | 23 (14.5) | 25 (14.8) | 15 (16.1) | 12 (11.5) | 115 (14.8) |
| County of residence | ||||||||
| Urban | 70 (100.0) | 90 (77.6) | 28 (42.4) | 86 (54.1) | 169 (100.0) | 74 (79.6) | 76 (73.8) | 593 (76.4) |
| Rural | 0 (0.0) | 26 (22.4) | 38 (57.6) | 73 (45.9) | 0 (0.0) | 19 (20.4) | 27 (26.2) | 183 (23.6) |
| HPV Type | ||||||||
| HPV16 positive | 34 (48.6) | 54 (46.6) | 35 (53.0) | 84 (52.8) | 88 (52.1) | 45 (48.4) | 55 (52.9) | 395 (50.8) |
| HPV18 positive, HPV16 negative | 9 (12.9) | 18 (15.5) | 11 (16.7) | 28 (17.6) | 17 (10.1) | 17 (18.3) | 22 (21.2) | 122 (15.7) |
| Positive for other oncogenic types | 17 (24.3) | 30 (25.9) | 11 (16.7) | 25 (15.7) | 41 (24.3) | 22 (23.6) | 16 (15.4) | 162 (20.9) |
| Positive for other types | 2 (2.9) | 6 (5.1) | 2 (3.0) | 6 (3.8) | 3 (1.8) | 4 (4.3) | 2 (1.9) | 25 (3.2) |
| Negative for HPV | 8 (11.3) | 8 (6.9) | 7 (10.6) | 16 (10.1) | 20 (11.8) | 5 (5.4) | 9 (8.6) | 73 (9.4) |
Palm Beach, Broward, Miami-Dade Counties.
Rural-Urban Continuum Codes (1–3 for urban, 4–9 for rural).
See Methods section for further explanation of HPV Type hierarchical groups.
HPV31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, 68
HPV types for invasive cervical cancers by selected demographic and clinical variables, and odds ratios comparing HPV positive and negative cases
| HPV16 | HPV18 | Positive for | Positive | Negative | Odds | Odds Ratio | ||
|---|---|---|---|---|---|---|---|---|
| Total | No. (%) | No. (%) | No. (%) | No. (%) | No. (%) | |||
| Total | 777 | 395 (50.8) | 122 (15.7) | 162 (20.9) | 25 (3.2) | 73 (9.4) | -- | -- |
| Race/Ethnicity | ||||||||
| White, non-Hispanic | 409 | 213 (52.1) | 64 (15.7) | 72 (17.6) | 12 (2.9) | 48 (11.7) | 2.53 | 1.0–6.41 |
| Black, non-Hispanic | 129 | 64 (49.6) | 24 (18.6) | 32 (24.8) | 3 (2.3) | 6 (4.7) | 1.0 | (--) |
| Hispanic | 124 | 63 (50.8) | 16 (12.9) | 30 (24.2) | 5 (4.0) | 10 (8.1) | 2.01 | 0.65–6.19 |
| Asian, Pacific Islander | 93 | 40 (43.0) | 16 (17.2) | 24 (25.8) | 5 (5.4) | 8 (8.6) | 1.97 | 0.62–6.89 |
| All other | 17 | 11 (64.7) | 1 (5.9) | 4 (23.5) | 0 (0.0) | 1 (5.9) | 2.67 | 0.28–25.69 |
| Age | ||||||||
| <30 | 45 | 25 (55.6) | 10 (22.2) | 7 (15.6) | 0 (0.0) | 3 (6.6) | 1.72 | 0.41–7.22 |
| 30–39 | 183 | 108 (59.0) | 27 (14.7) | 39 (21.3) | 1 (0.6) | 8 (4.4) | 1.02 | 0.36–2.86 |
| 40–49 | 204 | 111 (54.4) | 42 (20.6) | 38 (18.6) | 5 (2.5) | 8 (3.9) | 1.0 | (--) |
| 50–69 | 230 | 104 (45.2) | 32 (13.9) | 51 (22.2) | 13 (5.7) | 30 (13.0) | 3.18 | 1.37–7.38 |
| 70+ | 115 | 47 (40.8) | 11 (9.6) | 27 (23.5) | 6 (5.2) | 24 (20.9) | 5.80 | 2.40–13.97 |
| Histology | ||||||||
| Squamous | 570 | 317 (55.6) | 61 (10.7) | 141 (24.7) | 23 (4.0) | 28 (5.0) | 1.0 | (--) |
| Adenocarcinoma | 179 | 65 (36.3) | 58 (32.4) | 19 (10.6) | 1 (0.6) | 36 (20.1) | 5.10 | 2.88–9.04 |
| All other | 28 | 13 (46.4) | 3 (10.7) | 2 (7.1) | 1 (3.6) | 9 (32.1) | 6.25 | 2.31–16.91 |
| Stage | ||||||||
| Local | 367 | 191 (52.0) | 66 (17.9) | 78 (21.3) | 9 (2.5) | 23 (6.3) | 1.0 | (--) |
| Regional | 246 | 127 (51.6) | 27 (10.9) | 55 (22.4) | 10 (4.1) | 27 (11.0) | 1.57 | 0.83–2.99 |
| Distant | 74 | 37 (50.0) | 13 (17.6) | 9 (12.1) | 3 (4.1) | 12 (16.2) | 1.94 | 0.83–4.56 |
| Unknown | 90 | 40 (44.4) | 16 (17.8) | 20 (22.2) | 3 (3.3) | 11 (12.2) | 1.92 | 0.82–4.53 |
| Tumor grade | ||||||||
| Grade I | 66 | 38 (57.6) | 16 (24.2) | 4 (6.1) | 3 (4.5) | 5 (7.6) | 1.0 | (--) |
| Grade II | 237 | 122 (51.5) | 30 (12.7) | 57 (24.0) | 8 (3.4) | 20 (8.4) | 1.66 | 0.54–5.10 |
| Grade III | 252 | 121 (47.8) | 44 (17.4) | 48 (19.0) | 8 (3.2) | 31 (12.6) | 1.85 | 0.61–5.59 |
| Grade IV | 12 | 1 (8.3) | 4 (33.3) | 4 (33.3) | 0 (0.0) | 3 (25.0) | 2.30 | 0.37–14.02 |
| Unknown | 210 | 113 (53.8) | 28 (13.3) | 49 (23.3) | 6 (2.9) | 14 (6.7) | 1.14 | 0.35–3.71 |
Odds ratios correspond to a logistic regression model to examine factors associated with HPV negative results (binary outcome). All the variables in this table were included in the model. For each variable, the category with the lowest percentage of HPV negatives was selected as the reference group (OR=1).
5 cases were missing race/ethnicity data and were not included here
Coded as squamous cell carcinoma, adenocarcinoma (including adenosquamous and glassy cell), and all other (including small cell, neuroendocrine and other rare types), as in Watson et al, 2008.
HPV type distribution among invasive cervical cancer cases by hierarchical group
| HPV Types | Number | Percent |
|---|---|---|
| 395 | 50.8 | |
| HPV16 | 342 | 44.0 |
| HPV16, 18 | 10 | 1.4 |
| HPV16, 33 | 6 | 0.8 |
| HPV16, 45 | 5 | 0.6 |
| HPV16, 58 | 5 | 0.6 |
| HPV16, 52 | 4 | 0.5 |
| HPV16, 59 | 4 | 0.5 |
| HPV16, 31 | 2 | 0.3 |
| HPV16, 39 | 2 | 0.3 |
| HPV16, 56 | 2 | 0.3 |
| HPV16, 18, 31 | 1 | 0.1 |
| HPV16, 18, 33 | 1 | 0.1 |
| HPV16, 18, 33, 45 | 1 | 0.1 |
| HPV16, 18, 45, 52 | 1 | 0.1 |
| HPV16, 18, 51, 55, 73 | 1 | 0.1 |
| HPV16, 26 | 1 | 0.1 |
| HPV16, 35, 52, 55, 71, 72, 83 | 1 | 0.1 |
| HPV16, 42 | 1 | 0.1 |
| HPV16, 51, 68 | 1 | 0.1 |
| HPV16, 54 | 1 | 0.1 |
| HPV16, 61 | 1 | 0.1 |
| HPV16, 66 | 1 | 0.1 |
| HPV16, is39 | 1 | 0.1 |
| 122 | 15.7 | |
| HPV18 | 116 | 14.9 |
| HPV18, 33 | 1 | 0.1 |
| HPV18, 35, 70, 73 | 1 | 0.1 |
| HPV18, 45 | 1 | 0.1 |
| HPV18, 52 | 1 | 0.1 |
| HPV18, 70 | 1 | 0.1 |
| HPV18, 72 | 1 | 0.1 |
| 162 | 20.9 | |
| HPV45 | 41 | 5.3 |
| HPV33 | 25 | 3.2 |
| HPV31 | 15 | 1.9 |
| HPV35 | 15 | 1.9 |
| HPV52 | 14 | 1.8 |
| HPV39 | 13 | 1.7 |
| HPV58 | 13 | 1.7 |
| HPV56 | 6 | 0.8 |
| HPV59 | 6 | 0.8 |
| HPV68 | 4 | 0.5 |
| HPV51 | 3 | 0.4 |
| HPV66 | 2 | 0.3 |
| HPV33, 58 | 2 | 0.3 |
| HPV39, 45 | 1 | 0.1 |
| HPV53, 56 | 1 | 0.1 |
| HPV11, 31 | 1 | 0.1 |
| Other rare HPV types | 25 | 3.2 |
| Negative for HPV | 73 | 9.4 |
Includes 6,11,26,40,54,62,67,69,70,73,82, is 39 and four cases detected but not typed.