Enteric viruses introduced from the community are major causes of these illnesses.
Viruses are the major pathogens of community-acquired (CA) acute gastroenteritis (AGE) in children, but their role in healthcare-associated (HA) AGE is poorly understood. Children with AGE hospitalized at Alder Hey Children’s Hospital, Liverpool, UK, were enrolled over a 2-year period. AGE was classified as HA if diarrhea developed
Enteric viruses are major etiologic agents of acute gastroenteritis (AGE) among infants and young children worldwide (
Although studies of viral gastroenteritis in children have mainly focused on community-acquired (CA) infection, the importance of healthcare-associated (HA) rotavirus infection and the potential for its prevention by vaccination has been highlighted in several recent publications (
The value of molecular methods in defining the contribution of multiple viruses to pediatric diarrheal disease is being increasingly recognized (
The study was conducted at the Royal Liverpool Children’s National Health Service Foundation Trust (Alder Hey Hospital). Alder Hey provides primary, secondary, and tertiary care facilities for >200,000 children each year and has ≈300 inpatient beds. General medicine, general surgery, and a range of specialist services including critical care, oncology, cardiac, and neurosurgery are provided.
Children <16 years of age who were admitted with AGE during January 1, 2006–December 31, 2007, or those in whom AGE developed after hospitalization, were eligible for inclusion in the study. AGE was defined as diarrhea (≥3 loose, or looser-than-normal, stools in a 24-hour period), with or without vomiting, of <7 days’ duration. Gastroenteritis was considered HA if symptoms developed ≥48 hours after admission. Written informed consent was obtained from the child’s parent or guardian before enrollment.
Study nurses identified case-patients by daily chart review. Clinical data were collected when patients were admitted and prospectively until hospital discharge. We used these data to calculate a severity score using a modified 20-point scoring system (
| Clinical sign or symptom | Points |
|---|---|
| Duration of diarrhea, d | |
| <2 | 1 |
| 2–4 | 2 |
| >4 | 3 |
| Maximum no. diarrheal stools in 24 h | |
| 3 | 1 |
| 4–5 | 2 |
| >5 | 3 |
| Duration of vomiting, d | |
| No vomiting | 0 |
| 1–2 | 2 |
| 3 | |
| Maximum no. vomiting episodes in 24 h | |
| 1 | 1 |
| 2 | 2 |
| 3 | |
| Rehydration | |
| None | 0 |
| Oral | 1 |
| Intravenous | 2 |
| Fever, ºC | |
| <37.6 | 0 |
| 37.6ºC–38.5 | 2 |
| >38.5 | 3 |
| Behavior | |
| Normal | 0 |
| Lethargic/irritable | 1 |
| Convulsion | 3 |
Nucleic acid was extracted from 10% fecal suspensions in phosphate buffered saline by using the RNeasy mini kit (QIAGEN, Crawley, UK). After reverse transcription–PCR (RT-PCR) was performed by using random hexamers, rotavirus, adenovirus 40/41, astrovirus, and sapovirus were each detected by conventional PCR using virus-specific primers, agarose gel electrophoresis, and ethidium bromide staining (
Rotavirus viral protein (VP) 7 (G) and VP4 (P) were genotyped by using multiplex, heminested RT-PCR (
AGE in 669 children met the case definition for investigation during the study. We excluded 93 children from analysis because of failure to obtain fecal specimens (80 children), consent refusal/withdrawal (12), and age >16 years (1). Of the remaining 576 children with AGE, 351 cases (61%) were determined to be CA and 225 (39%) were HA.
During the study period, ≥1 viruses were detected in 339 (59%) of 576 specimens. Rotavirus was identified most frequently (38% of all AGE cases), followed by norovirus (16%), adenovirus 40/41 (14%), astrovirus (5%), and sapovirus (5%) (
| Virus | No. (%) case-patients | |
|---|---|---|
| HA-AGE, n = 225 | CA-AGE, n = 351 | |
| Rotavirus | 70 (31) | 150 (43) |
| Norovirus | 36 (16) | 54 (15) |
| Adenovirus 40/41 | 34 (15) | 49 (14) |
| Astrovirus | 12 (5) | 16 (5) |
| Sapovirus | 5 (2) | 22 (6) |
| Any virus detected | 120 (53) | 219 (62) |
| No virus detected | 105 (47) | 132 (38) |
*CA-AGE, community-acquired acute gastroenteritis; HA-AGE, healthcare-associated acute gastroenteritis.
In 98 (17%) of 576 children with AGE, >1 virus was detected; this proportion did not significantly differ between CA (65/351 cases, 19%) and HA (33/225, 15%) infection. Rotavirus was the agent least likely to be identified as a mixed infection; it occurred as the only virus in 144 (65%) of 220 AGE cases in which it was identified. This proportion did not differ between patients with CA (100/150, 66%) and HA (44/70, 62%) rotavirus infection (
| Virus | Total no. case-patients | No. case-patients also infected with | |||||
|---|---|---|---|---|---|---|---|
| Rotavirus | Norovirus | Adenovirus 40/41 | Astrovirus | Sapovirus | >2 viruses | ||
| Rotavirus | 76 | 14 | 16 | 3 | 10 | 7 | |
| Norovirus | 44 | 6 | 6 | 2 | 3 | 4 | |
| Adenovirus 40/41 | 48 | 10 | 2 | 1 | 2 | 5 | |
| Astrovirus | 16 | 4 | 2 | 2 | 0 | 2 | |
| Sapovirus | 23 | 1 | 1 | 0 | 0 | 4 | |
| >2 viruses | 37 | 5 | 4 | 4 | 0 | 2 | |
*Enumerates case-patients in whom >1 virus was identified. Numbers above diagonal represent community-acquired acute gastroenteritis (AGE); numbers below diagonal represent healthcare-associated AGE. NHS, National Health Service.
The median age of children with all-cause CA-AGE (10 mo, range 1–180 mo) did not differ from children with all-cause HA-AGE (12 mo, range 1–192 mo). Among case-patients, the median age of children with rotavirus infection (11 mo, range 1–192 mo) was similar to children excreting norovirus (10 mo, range 1–180 mo); adenovirus 40/41 (10 mo, 1–180 mo); astrovirus (9 mo, 1–180 mo); and sapovirus (12 mo, 1–96 mo). The median age of children excreting any virus did not differ according to exposure setting (data not shown).
The severity of AGE caused by infection only with rotavirus or norovirus was greater than with other viruses for CA and HA infections (
| Virus | HA-AGE, n = 225 (range) | CA-AGE, n = 351 (range) |
|---|---|---|
| Rotavirus | 8 (3–17) | 8 (2–16) |
| Norovirus | 8 (3–14) | 9 (2–15) |
| Adenovirus 40/41 | 6 (3–12) | 6 (4–14) |
| Astrovirus | 7.5 (6–9) | 7.5 (5–11) |
| Sapovirus | 11 (11) | 5 (4–8) |
| Any virus detected | 8 (3–17) | 8 (2–16) |
| No virus detected | 7 (3–15) | 7 (2–15) |
*CA-AGE, community-acquired acute gastroenteritis; HA-AGE, healthcare-associated acute gastroenteritis.
Rotavirus genotype could be determined for 93 (62%) of 150 CA-AGE cases and for 23 (33%) of 70 HA-AGE cases (rotaviruses that could not be genotyped were considered to contain insufficient virus load in stool [data not shown]). Distribution of rotavirus strains did not differ between CA and HA cases, with the P[8],G1 strain predominating in each. Thus, of rotaviruses genotyped from 93 patients with CA rotavirus, genotypes of 62 gastroenteritis patients were P[8], G1; 7 were P[8], G3; 4 were P[4], G2; 18 were P[8], G9; and 1 was P[8], G4; 1 strain could not be G or P typed. Of rotaviruses genotyped from 23 patients with HA rotavirus gastroenteritis, 19 were P[8], G1; 1 was P[8], G3; 2 were P[4], G2; and 1 was P[4], G1 + G2.
To explore whether HA-AGE cases were associated with similar or identical rotavirus strains causing CA-AGE, we examined P[8], G1 rotaviruses further by PAGE and by VP7 gene sequencing. Three distinct electropherotypes (L1, L2, and L3) were identified among 19 HA P[8], G1 strains, and each of these electropherotypes also was recognized among 7 electropherotypes assigned to 62 CA P[8], G1 strains (data not shown). Similarly, all except 2 VP7 nucleotide sequences from HA-AGE rotavirus infections clustered with corresponding sequences from CA strains with which they shared almost identical or identical nucleotide sequence (
Phylogenetic tree based on viral protein (VP) 7 nucleotide sequences of serotype G1 rotavirus strains from Royal Liverpool Children’s National Health Service Foundation Trust (Alder Hey Hospital), Liverpool, UK. For each strain the source (healthcare-associated [HA] or community-acquired [CA]), specimen number, month/year of detection, and name of the strain is indicated. Reference G1P[8] strain Wa is included. Horizontal lengths are proportional to the genetic distance calculated with Kimura’s 2-parameter method. Scale bar shows genetic distance expressed as nucleotide substitutions per site. Bootstrap probabilities >80% (>800 of 1,000 pseudoreplicate trials) are indicated at each node. Hatched VP7 sequences are from strains whose electropherotypes shared an identical L1 pattern. The VP7 nucleotide sequences used in the tree have been deposited under the strain name and accession number (in parentheses) as follows; 06AH001 (FJ797814), 06AH005 (FJ797815), 06AH033 (FJ797816), 06AH037 (FJ797817), 06AH041 (FJ797818), 06AH043 (FJ797819), 06AH047 (FJ797820), 06AH077 (FJ797821), 06AH083 (FJ797822), 06AH099 (FJ797823), 06AH143 (FJ797824), 06AH161 (FJ797825), 06AH167 (FJ797826), 06AH175 (FJ797827), 06AH218 (FJ797828), 07AH441 (FJ797829), 07AH451 (797830), 07AH466 (FJ797831), 07AH467 (FJ797832), 07AH468 (FJ797833) , 07AH490 (FJ797834), 07AH491 (FJ797835), 07AH500 (FJ797836), 07AH506 (FJ797837), 07AH508 (FJ797838), 07AH517 (FJ797839).
Phylogenetic tree based on 387 nucleotide sequences of the 5′ end of open reading frame 2 (encoding viral protein 1) of norovirus strains from Royal Liverpool Children’s National Health Service Foundation Trust (Alder Hey Hospital), Liverpool, UK. For each strain the source (healthcare-associated [HA] or community-acquired [CA]), specimen number, month/year of detection, and the name of the strain is indicated. Reference strains included on the tree are GII/1 U07611 Hawaii/71/US, GII/2 X81879 Melksham/89/UK, GII/3 U22498 Mexico/89/MX, GII/4 X86557 Lordsdale/93/UK, GII/5 AJ277607 Hillingdon/90/UK, GII/6AB039776 SaitamaU3/97/JP, GII/7 AJ277608 Leeds/90/UK, GII/8 AB067543 SaitamaU25/98/JP, GII/9 AY054299 IdahoFalls/378/96/US, GII/10 AY237415 Mc37/99/Thai, GII/11 AB112221 SaitamaT29GII/01/JP, GII/12 AB039775 SaitamaU1/97/JP, GII/13 AY130761 M7/99/US, GII/14 AB078334 Kashiwa47/00/JP, GII/15 AB058582 SaitamaKu80aGII/99/JP, GII/16 AB112260 SaitamaT53GII/02/JP, GII/17 AF195847 Alphatron/98/NE, GI/1 M87661 Norwalk/68/US, AJ313030 Queen’sArms/Leeds/92/UK, AJ277615 Sindlesham/95/UK. Horizontal lengths are proportional to the genetic distance calculated with the Kimura 2-parameter method. Scale bar shows genetic distance expressed as nucleotide substitutions per site. Bootstrap probabilities >80% (>800 of 1,000 pseudoreplicate trials) are indicated at each node. The nucleotide sequences used in the tree have been deposited under the strain name and accession number (in parentheses) as follows; 06AH107 (FJ797840), 06AH109 (FJ797841), 06AH187 (FJ797842), 06AH194 (FJ797843), 06AH225 (FJ797844), 06AH387 (FJ797845), 06AH395 (FJ797846), 06AH397 (FJ797847), 06AH040 (FJ797848), 06AH402 (FJ797849), 06AH406 (FJ797850), 06AH408 (FJ797851), 06AH410 (FJ797852), 07AH448 (FJ797853), 06AH050 (FJ797854), 07AH509 (FJ797855), 07AH517 (FJ797856) 07AH525 (FJ797857), 07AH551 (FJ797858), 07AH570 (FJ797859), 07AH571 (FJ797860), 07AH579 (FJ797861), 07AH590 (FJ797862), 07AH602 (FJ797863), 07AH604 (FJ797864), 07AH611 (FJ797865), 07AH612 (FJ797866), 07AH616 (FJ797867), 07AH619 (FJ797868), 07AH623 (FJ797869), 07AH633 (FJ797870), 07AH642 (FJ797871), 07AH643 (FJ797872), 07AH651 (FJ797873), 07AH653 (FJ797874), 07AH654 (FJ797875), 06AH097 (FJ797876).
Although 274 (94%) of 291 patients with CA viral gastroenteritis were located in acute general medical and surgical wards, 88 (56%) of 157 with HA viral gastroenteritis were located elsewhere in the hospital. In particular, the highest rates of HA viral gastroenteritis infection were noted in critical care units (intensive care unit and high dependency unit), neurology, cardiology, and long stay wards where children with chronic conditions who have complex healthcare needs are patients (although this represents <5 case-patients) (
Distribution of case-patients with A) community-acquired versus B) healthcare-associated acute gastroenteritis (AGE) in whom a virus was detected, by ward category and virus detected, Alder Hey Hospital, Liverpool, UK, 2006–2007. Rates were calculated as numbers of cases per 1,000 admissions to each ward throughout the study and are shown for each virus tested, with a comparison of all cases where at least 1 virus was detected (diamonds).
In our study, one fifth of AGE among children within a large pediatric hospital was of viral origin and acquired within the healthcare setting. Furthermore, at least 1 virus was detected in >50% of HA-AGE patients, and in 28%, >1 virus was identified. HA viral gastroenteritis is a major infection control issue in hospital pediatric wards (
Rotavirus was the most common virus identified among children with CA- and HA-AGE (43% and 31%, respectively). It was also the virus most likely to occur alone and was the virus with which severe symptoms were most often associated. A recent review of European studies identified rotavirus in 31%–87% of all-cause HA-AGE, reflecting the differences in methods used in individual studies (
With the availability and application of molecular assays capable of detecting a broad range of norovirus genotypes, norovirus is now recognized as a major cause of sporadic CA-AGE in children (
Previous studies have investigated adenovirus 40/41 in CA-AGE, and we systematically looked for it in children with HA-AGE. Adenovirus 40/41 was the third most commonly identified virus in our study among children with CA- and HA-AGE (detected in 14% and 15% of patients, respectively). Studies that have investigated for adenovirus 40/41 among children with CA-AGE by using antigen-based detection methods have generally reported detection rates of ≈5% (
With the use of molecular methods to detect 5 established viral agents of gastroenteritis, we demonstrated that 15% of HA-AGE patients contained >1 virus, emphasizing the value of the simultaneous examination for multiple viruses. Thus, in a recent community-based study in the United Kingdom that examined for each of these 5 viruses using molecular assays, mixed virus infections were identified in 11.7% of case-patients (
Although each of the enteric viruses detected in this study is firmly established as a gastroenteritis pathogen, the detection of a virus in a child with AGE does not necessarily imply causation. This is most clearly relevant in the context of co-infections including mixed virus infections, where
The entry and spread of enteric viruses into and within pediatric healthcare settings is not completely understood. Several studies have indicated that multiple rotavirus introductions from the community into the hospital and subsequent spread between patients accounts for most HA rotavirus infections because of the diversity among strains recovered from hospitalized children and similarity at the genotype level between viruses circulating within the community and hospital (
In contrast to CA-AGE cases, the highest rates of HA- viral enteric infections did not occur on the acute medical and surgical wards but instead in the critical care areas, neurologic, cardiac, and long stay wards where chronically ill children are patients. We observed this trend for each of the 3 major viruses identified (rotavirus, norovirus, and adenovirus 40/41). Although we noticed differences in the hospital distribution of HA-AGE cases, the ages of children with HA-AGE did not differ significantly from children with CA-AGE. We did, however, find evidence for severe disease among 28% of children with HA viral gastroenteritis in our study; 22% of such children had an underlying medical condition (data not shown). Given that CA viruses are likely to be the source of HA viral gastroenteritis, standard hospital infection prevention measures (e.g., isolation of children with AGE) should be emphasized (
In conclusion, we have demonstrated that viruses accounted for more than half the cases of HA-AGE in a large pediatric hospital and resulted from the frequent introduction of gastroenteritis viruses from the community. Because rotavirus is the single most common pathogen, introduction of a rotavirus vaccine into childhood immunization programs is expected to substantially reduce the incidence of CA and HA rotavirus gastroenteritis in hospitals.
We thank the patients and staff at Alder Hey for their participation and cooperation and W. Dove for assistance with sequence analysis.
O.N. and T.N. are honorary members of University of Liverpool and participated in this study according to the Agreement on Academic Partnership between University of Liverpool and Nagasaki University. Their travel was partly supported by the Global Centre of Excellence Program, Nagasaki University. The study was approved by the Liverpool Paediatric Research Ethics Committee (COREC no. 05/Q1502/155) and was funded by Sanofi Pasteur MSD.
Dr Cunliffe is a reader in medical microbiology, University of Liverpool, and Honorary Consultant Microbiologist, Royal Liverpool Children’s National Health Service Foundation Trust. His research focuses on the epidemiology and prevention of viral gastroenteritis.