A total of 55 students had clinical symptoms of gastroenteritis, including diarrhea (45), vomiting (22), abdominal cramps (17), and fever (2). The clinical symptoms continued for up to 10 days (mean 4.7 days). Stool specimens were collected from 8 of 55 students on May 8 (
| Specimen no. | Patient sex/age, y | Date of illness onset | EM results | RT-PCR results | Copies cDNA/g of stool‡ | Symptom | |||
|---|---|---|---|---|---|---|---|---|---|
| Fever | Diarrhea | Vomiting | Abdominal pain | ||||||
| 1 | F/20 | May 5 | – | + | 1.69 × 108 | – | + | + | + |
| 2 | F/26 | May 5 | – | + | 6.19 ×108 | – | + | + | – |
| 3 | M/19 | May 6 | – | + | 2.32 × 108 | – | + | – | + |
| 4 | M/18 | May 6 | – | + | 3.24 × 108 | – | + | + | + |
| 5 | F/21 | May 7 | + | + | 1.72 × 1010 | – | + | – | – |
| 6 | F/18 | May 4 | – | – | – | + | + | + | – |
| 7 | M/19 | May 7 | – | + | 4.28 × 108 | – | + | + | + |
| 8 | F/20 | May 6 | – | + | 2.86 × 107 | – | + | – | + |
*EM, electron microscopy; RT-PCR, reverse transcription–PCR; –, negative; +, positive. †All specimens were collected May 8. ‡cDNA copies were determined by real-time PCR.
To confirm the EM results, we performed reverse transcription–PCR (RT-PCR), real-time RT-PCR, and sequence analysis as previously described (
Nucleotide sequences were prepared with the terminator cycle sequence kit (version 3.1) and determined with the ABI 3130 sequencer (Applied Biosystems, Foster City, CA, USA.). Nucleotide sequences were aligned by using ClustalX (
Of the 8 specimens, 7 were positive by RT-PCR and real-time RT-PCR (
To better classify the sapovirus, we reamplified the 3′ end of the genome from 1 positive specimen and sequenced ≈2,400 nt (nt 5074-3′) (Hu/SaV/9–5/Taipei/07/TW; GenBank accession no. EU124657). PCR was performed with SV-F13, SV-F14, and TX30SXN primers as described (
Sapovirus was reported in Japan in water samples (untreated wastewater, treated wastewater, and a river) and in clam samples intended for human consumption (
In addition, the viral load in this study appeared to be comparatively high. These results suggest that some sapovirus genotypes are more virulent than others. Similar findings were obtained with norovirus infections around the world; strains belonging to norovirus GII/4 were the most prevalent in many countries. Although several recombinant sapovirus strains have been identified and found to be the cause of increased numbers of infections in some countries (
Phylogenetic analysis of sapovirus capsid nucleotide sequence showing the close relatedness of Taiwan strain Hu/SaV/9-5/Taipei/07/TW to Chiba041413 (genogroup GI/2). The numbers on each branch indicate the bootstrap values for the genotype. Bootstrap values of 95% or higher were considered statistically significant for the grouping. Scale bar represents nucleotide substitutions per site. GenBank accession numbers for the reference strains are as follows (from top): Parkville, U73124; Houston27, U95644; Potsdam, AF294739; Hu/SaV/9-5/Taipei/07/TW, EU124657; Chiba041413, AB258427; Stockholm318, AF194182; Ehime643, DQ366345; Chiba000496F, AJ412800; Sapporo, U65427; Manchester, X86560; SW278, DQ125333; Ehime1107, DQ058829; Arg39, AY289803; NK24, AY646856; Cruise ship, AY289804; C12, AY603425; Mc10, AY237420; Mex340, AF435812; Mc2, AY237419; PEC, AF182760. Boldface indicates the strain isolated in this study.
This study was supported in part by research grant DOH96-DC-2013 and DOH96-DC-2016 from Centers for Disease Control, Taiwan.