<!DOCTYPE article
PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD with MathML3 v1.3 20210610//EN" "JATS-archivearticle1-3-mathml3.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="1.3" xml:lang="en" article-type="research-article"><?properties manuscript?><processing-meta base-tagset="archiving" mathml-version="3.0" table-model="xhtml" tagset-family="jats"><restricted-by>pmc</restricted-by></processing-meta><front><journal-meta><journal-id journal-id-type="nlm-journal-id">9505216</journal-id><journal-id journal-id-type="pubmed-jr-id">20448</journal-id><journal-id journal-id-type="nlm-ta">Anaerobe</journal-id><journal-id journal-id-type="iso-abbrev">Anaerobe</journal-id><journal-title-group><journal-title>Anaerobe</journal-title></journal-title-group><issn pub-type="ppub">1075-9964</issn><issn pub-type="epub">1095-8274</issn></journal-meta><article-meta><article-id pub-id-type="pmid">23403280</article-id><article-id pub-id-type="pmc">11317973</article-id><article-id pub-id-type="doi">10.1016/j.anaerobe.2013.01.006</article-id><article-id pub-id-type="manuscript">HHSPA2012774</article-id><article-categories><subj-group subj-group-type="heading"><subject>Article</subject></subj-group></article-categories><title-group><article-title>Community-associated <italic toggle="yes">Clostridium difficile</italic> infection: How real is it?</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Lessa</surname><given-names>Fernanda C.</given-names></name><xref rid="CR1" ref-type="corresp">*</xref></contrib><aff id="A1">Division of Healthcare Quality Promotion, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, 1600 Clifton Rd NE, MS A-24, Atlanta, GA 30333, USA</aff></contrib-group><author-notes><corresp id="CR1"><label>*</label> fax: +1 404 639 2647. <email>flessa@cdc.gov</email>, <email>dta3@cdc.gov</email>.</corresp></author-notes><pub-date pub-type="nihms-submitted"><day>6</day><month>8</month><year>2024</year></pub-date><pub-date pub-type="ppub"><month>12</month><year>2013</year></pub-date><pub-date pub-type="epub"><day>08</day><month>2</month><year>2013</year></pub-date><pub-date pub-type="pmc-release"><day>12</day><month>8</month><year>2024</year></pub-date><volume>24</volume><fpage>121</fpage><lpage>123</lpage><abstract id="ABS1"><p id="P1">Community-associated <italic toggle="yes">Clostridium difficile</italic> infection (CA-CDI) represents 32% of all CDI cases based on U.S. population-based data. The current epidemic strain, NAP1, is the most prevalent strain causing these infections. Although complications, recurrence and death are uncommon, one-fourth of the CA-CDI patients are hospitalized within 7 days after the diagnosis.</p></abstract><kwd-group><kwd>Community-associated</kwd><kwd><italic toggle="yes">Clostridium difficile</italic> infection</kwd><kwd>Surveillance</kwd></kwd-group></article-meta></front><body><p id="P2">In the early 2000s, a previously uncommon <italic toggle="yes">Clostridium difficile</italic> strain designated restriction endonuclease analysis type BI, North American pulsed-field gel electrophoresis type 1 (NAP1), PCR ribotype 027 (i.e., BI/NAP1/027) was found to be causing outbreaks in Canada, United States, and Europe [<xref rid="R1" ref-type="bibr">1</xref>&#x02013;<xref rid="R3" ref-type="bibr">3</xref>]. Since then, increases in incidence and severity of <italic toggle="yes">C. difficile</italic> infection (CDI) among hospitalized patients have been documented [<xref rid="R3" ref-type="bibr">3</xref>&#x02013;<xref rid="R5" ref-type="bibr">5</xref>], and in at least one US region [<xref rid="R6" ref-type="bibr">6</xref>], <italic toggle="yes">C. difficile</italic> is now the most common cause of healthcare-associated infections. In addition to its emergence as an important healthcare-acquired pathogen, <italic toggle="yes">C. difficile</italic> has also been increasingly reported among individuals in the community who were traditionally considered to be at low risk, such as healthy peripartum women, children and persons with minimal or no recent exposure to healthcare settings [<xref rid="R7" ref-type="bibr">7</xref>].</p><p id="P3">In response to these changes in <italic toggle="yes">C. difficile</italic> epidemiology, the Centers for Disease Control and Prevention (CDC) launched an active, population-based surveillance for CDI in 2009 through the Emerging Infections Program (EIP). The objectives and methods of this surveillance have been described elsewhere [<xref rid="R8" ref-type="bibr">8</xref>]. Briefly, one of the objectives of the EIP CDI surveillance is to describe the epidemiology of community-associated CDI (CA-CDI). In order to do that, EIP epidemiologists in each participating site investigate all positive <italic toggle="yes">C. difficile</italic> toxin or molecular assays from clinical, reference and commercial laboratories serving the catchment area. A case for the surveillance is defined as a positive <italic toggle="yes">C. difficile</italic> stool specimen in a resident of surveillance area aged 1 year or older who did not have a positive test in the previous 8 weeks. Medical records are reviewed to collect information on symptoms, co-infections, outcomes and recent healthcare exposures. Based on location of stool collection and healthcare exposures in the 12 weeks prior to specimen collection, cases are classified as community-associated (CA) if a positive specimen was collected as an outpatient or within 3 days of an acute care admission in a patient without documentation of an overnight stay in a healthcare-facility in the 12 weeks prior to stool collection; or healthcare-associated (HA) if positive specimen was collected more than 3 days after hospital admission, any time during nursing-home stay, or in a patient with documented overnight stay in a healthcare-facility in the 12 weeks prior to stool collection. As part of this surveillance, cultures are obtained from a convenience sample of positive <italic toggle="yes">C. difficile</italic> stool specimens, and recovered <italic toggle="yes">C. difficile</italic> isolates are sent to CDC laboratory for molecular characterization.</p><p id="P4">In 2010, CDI surveillance was conducted in eight diverse US geographic areas including: San Francisco County, CA; the five county Denver metropolitan area, CO; New Haven/Waterbury Area, CT; the eight county Atlanta metropolitan area, GA; Benton, Morrison, Stearns, and Todd Counties, MN; Monroe County, NY; Klamath County, OR; and Davidson County, TN. Seven of these eight surveillance sites contributed a full calendar year of data, while one site contributed 7 months of data.</p><p id="P5">A total of 10,342 CDI cases were identified across participating sites. Of those, 3269 (32%) were community-associated. The median age of CA-CDI cases was 52 years (range: 1&#x02013;93years), and 61% were female. Over one-fourth of the cases (27%) were hospitalized within the 7 days after positive <italic toggle="yes">C. difficile</italic> stool collection. Admission to the intensive care unit within the 7 days after stool collection, colectomy and death was uncommon: 2%, 0.3%, and 0.9% of cases, respectively. The recurrence rate was 9%; recurrences occurred a median of 26 days (range 14&#x02013;56 days) after the incident <italic toggle="yes">C. difficile</italic> positive stool specimen. Co-infections with other enteric pathogens were documented in 8 patients; 6 with <italic toggle="yes">Salmonella</italic> sp. and 2 with <italic toggle="yes">Shigella</italic> sp. Of the female patients with CA-CDI, 1% was in the peripartum period.</p><p id="P6">Of the 588 CA-CDI isolates submitted to CDC, the most common pulsed-field gel electrophoresis (PFGE) type was NAP1 (138; 23.5%), followed by NAP11 (67; 11.4%), and NAP4 (63, 10.7%). A large proportion of isolates did not fall under any of the known PFGE types and were classified as unnamed (<xref rid="T1" ref-type="table">Table 1</xref>).</p><p id="P7">The proportion of all CDI cases classified as CA-CDI, 32%, is higher than the 20%&#x02013;27% that have been previously reported in Canada and in one region of the United States using a similar definition [<xref rid="R9" ref-type="bibr">9</xref>,<xref rid="R10" ref-type="bibr">10</xref>]. A possible reason for this may be the inclusion of large outpatient/commercial laboratories in the surveillance. The incidence of CA-CDI is estimated to range between 20 and 40 per 100,000 population based on studies conducted prior to the introduction of molecular diagnostics for <italic toggle="yes">C. difficile</italic> [<xref rid="R11" ref-type="bibr">11</xref>,<xref rid="R12" ref-type="bibr">12</xref>]. Since 2009, the U.S. Food and Drug Administration (FDA) has approved five nucleic acid amplification tests (NAAT) for CDI diagnosis [<xref rid="R13" ref-type="bibr">13</xref>]. NAAT is known to have a higher sensitivity compared to enzyme immunoassay. Based on a recent meta-analysis, the overall sensitivity of NAAT was 90% (95% CI 88%&#x02013;91%) compared to toxigenic culture or cell culture cytotoxicity neutralization assay [<xref rid="R14" ref-type="bibr">14</xref>]. The adoption of more sensitive testing for CDI diagnosis by clinical and commercial laboratories will likely increase CDI rates overall, including CA-CDI rates.</p><p id="P8">Reports of CDI among peripartum women from 4 US states called attention to the risk of disease among this patient group [<xref rid="R7" ref-type="bibr">7</xref>]. Based on our data, the peripartum cases represented only a small proportion, 1%, of all CA-CDI cases among women suggesting that CDI among this group is still relatively uncommon.</p><p id="P9">The recurrence rate for CA-CDI (9%) in our data is lower than the 22% recurrence rate reported for healthcare-associated CDI (HA-CDI) cases by other investigators [<xref rid="R15" ref-type="bibr">15</xref>] and the 18% recurrence rate we found among HA-CDI cases. This may be related to several factors such as: 1) fewer exposures among CA-CDI cases to <italic toggle="yes">C. difficile</italic>-provocative antibiotics and to inpatient healthcare settings after the CDI diagnosis, which are known to be associated with increased risk of recurrent disease. Based on our data, CA-CDI cases who were hospitalized within the 7 days after positive <italic toggle="yes">C. difficile</italic> stool collection had a recurrence rate of 11% compared to 8% among those CA-CDI cases who were not admitted after the diagnosis reinforcing the hypothesis that inpatient healthcare exposure plays a role in recurrence rate; and 2) younger age among CA-CDI cases (median age of 52 years, compared to 74 years for HA-CDI cases).</p><p id="P10">Risk factors for CA-CDI have not been well explored. Although antibiotics are known to be the major drivers of CDI [<xref rid="R16" ref-type="bibr">16</xref>], there have been reports of CA-CDI among persons without antibiotic exposure [<xref rid="R9" ref-type="bibr">9</xref>,<xref rid="R17" ref-type="bibr">17</xref>]. This raised concerns about other potential risk factors for CDI in the community. The use of acid-suppressive agents, particularly proton pump inhibitors (PPI), has been associated with an increased risk of CA-CDI in some studies [<xref rid="R18" ref-type="bibr">18</xref>,<xref rid="R19" ref-type="bibr">19</xref>]. The mechanism by which PPI increases the risk of CDI is not fully understood, and no data are currently available suggesting that PPI stewardship will decrease CA-CDI rates.</p><p id="P11">The isolation of <italic toggle="yes">C. difficile</italic> in retail meat has led many investigators to suspect potential food borne transmission of this pathogen. Previous reports have shown a prevalence of 2%&#x02013;11% of <italic toggle="yes">C. difficile</italic> in retail meats [<xref rid="R20" ref-type="bibr">20</xref>&#x02013;<xref rid="R22" ref-type="bibr">22</xref>]. However, a recent study done across 9 US diverse geographic locations found no <italic toggle="yes">C. difficile</italic> in the 1755 retail meat products cultured [<xref rid="R23" ref-type="bibr">23</xref>]. <italic toggle="yes">C. difficile</italic> has also been isolated from the environment in outpatient clinics [<xref rid="R24" ref-type="bibr">24</xref>]and daycare centers [<xref rid="R25" ref-type="bibr">25</xref>], suggesting that the environment may play a role in disease transmission in the community. Finally, exposure to household members with CDI and children aged less than 2 years, a group that is known to be highly colonized with <italic toggle="yes">C. difficile</italic>, have been associated with an increased risk of <italic toggle="yes">C. difficile</italic> in the community [<xref rid="R11" ref-type="bibr">11</xref>,<xref rid="R26" ref-type="bibr">26</xref>]. Although these potential sources of <italic toggle="yes">C. difficile</italic> in the community have been described, they have not been fully evaluated, and epidemiologic correlation between these sources and CDI is still lacking.</p><p id="P12">In conclusion, community-associated CDI is real and it represents one-third of all CDI cases. The current epidemic strain, NAP1, is the most prevalent strain causing these infections. Although complications, recurrence and death are uncommon, one-fourth of the patients with CA-CDI are hospitalized within 7 days after the diagnosis. Studies looking at risk factors and sources of CDI in the community are needed to inform prevention strategies.</p></body><back><ack id="S1"><title>Acknowledgments</title><p id="P13">This surveillance would not be possible without the contributions of the following individuals: Lisa Winston, Joelle Nadle, Erin Garcia, Erin Parker, California Emerging Infections Program; Wendy Bamberg, Kelly Kast, Helen Johnston, Colorado Emerging Infections Program; James Meek, Carol Lyons, Connecticut Emerging Infections Program; Monica Farley, Leigh Ann Clark, Andrew Revis, Georgia Emerging Infections Program; Lucy Wilson, Rebecca Perlmutter, Malorie Givan, Maryland Emerging Infections Program; Ruth Lynfield, Stacy Holzbauer, Minnesota Emerging Infections Program; Erin Phipps, Joan Baumbach, Nathan Blacker, New Mexico Emerging Infections Program; Rebecca Tsay, Deborah Nelson, Ghinwa Dumyati, New York Emerging Infections Program; Zintars Beldavs, Valerie Ocampo, Oregon Emerging Infections Program; Samir Hannah, John Dunn, Amanda Ingram, Brenda Rue, Tennessee Emerging Infections Program; Jessica Cohen, Lydia Anderson, Duncan MacCannell, Brandi Limbago, L. Clifford McDonald, Scott Fridkin; Centers for Disease Control and Prevention.</p></ack><fn-group><fn fn-type="COI-statement" id="FN1"><p id="P14">Potential conflicts of interest</p><p id="P15">The author has no conflicts.</p></fn><fn id="FN2"><p id="P16">Disclaimer</p><p id="P17">The findings and conclusions in this report are those of the author and do not necessarily represent the official position of the Centers for Disease Control and Prevention.</p></fn></fn-group><ref-list><title>References</title><ref id="R1"><label>[1]</label><mixed-citation publication-type="journal"><name><surname>Muto</surname><given-names>CA</given-names></name>, <name><surname>Pokrywka</surname><given-names>M</given-names></name>, <name><surname>Shutt</surname><given-names>K</given-names></name>, <name><surname>Mendelsohn</surname><given-names>AB</given-names></name>, <name><surname>Nouri</surname><given-names>K</given-names></name>, <name><surname>Posey</surname><given-names>K</given-names></name>, <etal/>
<article-title>A large outbreak of Clostridium difficile-associated disease with an unexpected proportion of deaths and colectomies at a teaching hospital following increased fluoroquinolone use</article-title>. <source>Infect Control Hosp Epidemiol</source>
<year>2005</year>;<volume>26</volume>:<fpage>273</fpage>&#x02013;<lpage>80</lpage>.<pub-id pub-id-type="pmid">15796280</pub-id>
</mixed-citation></ref><ref id="R2"><label>[2]</label><mixed-citation publication-type="journal"><name><surname>McDonald</surname><given-names>LC</given-names></name>, <name><surname>Killgore</surname><given-names>GE</given-names></name>, <name><surname>Thompson</surname><given-names>A</given-names></name>, <name><surname>Owens</surname><given-names>RC</given-names><suffix>Jr</suffix></name>, <name><surname>Kazakova</surname><given-names>SV</given-names></name>, <name><surname>Sambol</surname><given-names>SP</given-names></name>, <etal/>
<article-title>An epidemic, toxin gene-variant strain of <italic toggle="yes">Clostridium difficile</italic></article-title>. <source>N Engl J Med</source>
<year>2005</year>;<volume>353</volume>:<fpage>2433</fpage>&#x02013;<lpage>41</lpage>.<pub-id pub-id-type="pmid">16322603</pub-id>
</mixed-citation></ref><ref id="R3"><label>[3]</label><mixed-citation publication-type="journal"><name><surname>Loo</surname><given-names>VG</given-names></name>, <name><surname>Poirier</surname><given-names>L</given-names></name>, <name><surname>Miller</surname><given-names>MA</given-names></name>, <name><surname>Oughton</surname><given-names>M</given-names></name>, <name><surname>Libman</surname><given-names>MD</given-names></name>, <name><surname>Michaud</surname><given-names>S</given-names></name>, <etal/>
<article-title>A predominantly clonal multi-institutional outbreak of Clostridium difficile-associated diarrhea with high morbidity and mortality</article-title>. <source>N Engl J Med</source>
<year>2005</year>;<volume>353</volume>:<fpage>2442</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="pmid">16322602</pub-id>
</mixed-citation></ref><ref id="R4"><label>[4]</label><mixed-citation publication-type="book"><name><surname>Lucado</surname><given-names>J</given-names></name>, <name><surname>Gould</surname><given-names>C</given-names></name>, <name><surname>Elixhauser</surname><given-names>A</given-names></name>. <part-title>Clostridium difficile infections (CDI) in hospital stays</part-title>. <source>Healthcare Cost and Utilization Project</source>. <publisher-name>Agency for Healthcare Research and Quality</publisher-name>. <comment>Statistical brief #124. <ext-link xlink:href="http://www.hcup-us.ahrq.gov/reports/statbriefs/sb124.pdf" ext-link-type="uri">http://www.hcup-us.ahrq.gov/reports/statbriefs/sb124.pdf</ext-link>.</comment> [<date-in-citation>accessed 28.08.2012</date-in-citation>].</mixed-citation></ref><ref id="R5"><label>[5]</label><mixed-citation publication-type="journal"><name><surname>McDonald</surname><given-names>LC</given-names></name>, <name><surname>Owings</surname><given-names>M</given-names></name>, <name><surname>Jernigan</surname><given-names>DB</given-names></name>. <article-title><italic toggle="yes">Clostridium difficile</italic> infection in patients discharged from US short-stay hospitals, 1996&#x02013;2003</article-title>. <source>Emerg Infect Dis</source>
<year>2006</year>;<volume>12</volume>:<fpage>409</fpage>&#x02013;<lpage>15</lpage>.<pub-id pub-id-type="pmid">16704777</pub-id>
</mixed-citation></ref><ref id="R6"><label>[6]</label><mixed-citation publication-type="journal"><name><surname>Miller</surname><given-names>BA</given-names></name>, <name><surname>Chen</surname><given-names>LF</given-names></name>, <name><surname>Sexton</surname><given-names>DJ</given-names></name>, <name><surname>Anderson</surname><given-names>DJ</given-names></name>. <article-title>Comparison of the burdens of hospital-onset, healthcare facility-associated Clostridium difficile infection and of healthcare-associated infection due to methicillin-resistant Staphylococcus aureus in community hospitals</article-title>. <source>Infect Control Hosp Epidemiol</source>
<year>2011</year>;<volume>32</volume>:<fpage>387</fpage>&#x02013;<lpage>90</lpage>.<pub-id pub-id-type="pmid">21460491</pub-id>
</mixed-citation></ref><ref id="R7"><label>[7]</label><mixed-citation publication-type="journal"><collab>Centers for Disease Control and Prevention (CDC)</collab>. <article-title>Severe Clostridium difficile-associated disease in populations previously at low riskdfour states, 2005</article-title>. <source>MMWR Morb Mortal Wkly Rep</source>
<year>2005</year>;<volume>54</volume>:<fpage>1201</fpage>&#x02013;<lpage>5</lpage>.<pub-id pub-id-type="pmid">16319813</pub-id>
</mixed-citation></ref><ref id="R8"><label>[8]</label><mixed-citation publication-type="webpage"><source>Measuring the scope of <italic toggle="yes">Clostridium difficile</italic> infection in the United States</source>. <comment><ext-link xlink:href="http://www.cdc.gov/hai/eip/cdiff_techinfo.html" ext-link-type="uri">http://www.cdc.gov/hai/eip/cdiff_techinfo.html</ext-link>.</comment> [<date-in-citation>accessed 28.08.2012</date-in-citation>].</mixed-citation></ref><ref id="R9"><label>[9]</label><mixed-citation publication-type="journal"><name><surname>Kutty</surname><given-names>PK</given-names></name>, <name><surname>Woods</surname><given-names>CW</given-names></name>, <name><surname>Sena</surname><given-names>AC</given-names></name>, <name><surname>Benoit</surname><given-names>SR</given-names></name>, <name><surname>Naggie</surname><given-names>S</given-names></name>, <name><surname>Frederick</surname><given-names>J</given-names></name>, <etal/>
<article-title>Risk factors for and estimated incidence of community-associated <italic toggle="yes">Clostridium difficile</italic> infection, North Carolina, USA</article-title>. <source>Emerg Infect Dis</source>
<year>2010</year>;<volume>16</volume>:<fpage>197</fpage>&#x02013;<lpage>204</lpage>.<pub-id pub-id-type="pmid">20113547</pub-id>
</mixed-citation></ref><ref id="R10"><label>[10]</label><mixed-citation publication-type="journal"><name><surname>Lambert</surname><given-names>PJ</given-names></name>, <name><surname>Dyck</surname><given-names>M</given-names></name>, <name><surname>Thompson</surname><given-names>LH</given-names></name>, <name><surname>Hammond</surname><given-names>GW</given-names></name>. <article-title>Population-based surveillance of <italic toggle="yes">Clostridium difficile</italic> infection in Manitoba, Canada, by using interim surveillance definitions</article-title>. <source>Infect Control Hosp Epidemiol</source>
<year>2009</year>
<month>Oct</month>; <volume>30</volume>(<issue>10</issue>):<fpage>945</fpage>&#x02013;<lpage>51</lpage>.<pub-id pub-id-type="pmid">19732008</pub-id>
</mixed-citation></ref><ref id="R11"><label>[11]</label><mixed-citation publication-type="journal"><name><surname>Wilcox</surname><given-names>MH</given-names></name>, <name><surname>Mooney</surname><given-names>L</given-names></name>, <name><surname>Bendall</surname><given-names>R</given-names></name>, <name><surname>Settle</surname><given-names>CD</given-names></name>, <name><surname>Fawley</surname><given-names>WN</given-names></name>. <article-title>A case-control study of community-associated <italic toggle="yes">Clostridium difficile</italic> infection</article-title>. <source>J Antimicrob Chemother</source>
<year>2008</year>;<volume>62</volume>:<fpage>388</fpage>&#x02013;<lpage>96</lpage>.<pub-id pub-id-type="pmid">18434341</pub-id>
</mixed-citation></ref><ref id="R12"><label>[12]</label><mixed-citation publication-type="journal"><name><surname>Nor&#x000e9;n</surname><given-names>T</given-names></name>, <name><surname>Akerlund</surname><given-names>T</given-names></name>, <name><surname>B&#x000e4;ck</surname><given-names>E</given-names></name>, <name><surname>Sj&#x000f6;berg</surname><given-names>L</given-names></name>, <name><surname>Persson</surname><given-names>I</given-names></name>, <name><surname>Alriksson</surname><given-names>I</given-names></name>, <etal/>
<article-title>Molecular epidemiology of hospital-associated and community-acquired <italic toggle="yes">Clostridium difficile</italic> infection in a Swedish county</article-title>. <source>J Clin Microbiol</source>
<year>2004</year>;<volume>42</volume>:<fpage>3635</fpage>&#x02013;<lpage>43</lpage>.<pub-id pub-id-type="pmid">15297509</pub-id>
</mixed-citation></ref><ref id="R13"><label>[13]</label><mixed-citation publication-type="webpage"><comment><ext-link xlink:href="http://www.fda.gov/MedicalDevices/ProductsandMedicalProcedures/DeviceApprovalsandClearances/default.htm" ext-link-type="uri">http://www.fda.gov/MedicalDevices/ProductsandMedicalProcedures/DeviceApprovalsandClearances/default.htm</ext-link>.</comment> [<date-in-citation>accessed 28.08.2012</date-in-citation>].</mixed-citation></ref><ref id="R14"><label>[14]</label><mixed-citation publication-type="journal"><name><surname>Deshpande</surname><given-names>A</given-names></name>, <name><surname>Pasupuleti</surname><given-names>V</given-names></name>, <name><surname>Rolston</surname><given-names>DD</given-names></name>, <name><surname>Jain</surname><given-names>A</given-names></name>, <name><surname>Deshpande</surname><given-names>N</given-names></name>, <name><surname>Pant</surname><given-names>C</given-names></name>, <etal/>
<article-title>Diagnostic accuracy of real-time polymerase chain reaction in detection of <italic toggle="yes">Clostridium difficile</italic> in the stool samples of patients with suspected <italic toggle="yes">Clostridium difficile</italic> infection: a meta-analysis</article-title>. <source>Clin Infect Dis</source>
<year>2011</year>
<month>Oct</month>;<volume>53</volume>(<issue>7</issue>):<fpage>e81</fpage>&#x02013;<lpage>90</lpage>.<pub-id pub-id-type="pmid">21890762</pub-id>
</mixed-citation></ref><ref id="R15"><label>[15]</label><mixed-citation publication-type="journal"><name><surname>Eyre</surname><given-names>DW</given-names></name>, <name><surname>Walker</surname><given-names>S</given-names></name>, <name><surname>Wyllie</surname><given-names>D</given-names></name>, <name><surname>Dingle</surname><given-names>KE</given-names></name>, <name><surname>Griffiths</surname><given-names>D</given-names></name>, <name><surname>Finney</surname><given-names>J</given-names></name>, <etal/>
<article-title>Predictors of first recurrence of <italic toggle="yes">Clostridium difficile</italic> infection: implications for initial management</article-title>. <source>Clin Infect Dis</source>
<year>2012</year>
<month>Aug</month>;<volume>55</volume>(<issue>Suppl. 2</issue>):<fpage>S77</fpage>&#x02013;<lpage>87</lpage>.<pub-id pub-id-type="pmid">22752869</pub-id>
</mixed-citation></ref><ref id="R16"><label>[16]</label><mixed-citation publication-type="journal"><name><surname>Hensgens</surname><given-names>MP</given-names></name>, <name><surname>Goorhuis</surname><given-names>A</given-names></name>, <name><surname>Dekkers</surname><given-names>OM</given-names></name>, <name><surname>Kuijper</surname><given-names>EJ</given-names></name>. <article-title>Time interval of increased risk for <italic toggle="yes">Clostridium difficile</italic> infection after exposure to antibiotics</article-title>. <source>J Antimicrob Chemother</source>
<year>2012</year>;<volume>67</volume>:<fpage>742</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="pmid">22146873</pub-id>
</mixed-citation></ref><ref id="R17"><label>[17]</label><mixed-citation publication-type="journal"><name><surname>Dumyati</surname><given-names>G</given-names></name>, <name><surname>Stevens</surname><given-names>V</given-names></name>, <name><surname>Hannett</surname><given-names>GE</given-names></name>, <name><surname>Thompson</surname><given-names>AD</given-names></name>, <name><surname>Long</surname><given-names>C</given-names></name>, <name><surname>Maccannell</surname><given-names>D</given-names></name>, <etal/>
<article-title>Community-associated <italic toggle="yes">Clostridium difficile</italic> infections, Monroe county, New York, USA</article-title>. <source>Emerg Infect Dis</source>
<year>2012</year>
<month>Mar</month>;<volume>18</volume>(<issue>3</issue>):<fpage>392</fpage>&#x02013;<lpage>400</lpage>.<pub-id pub-id-type="pmid">22377231</pub-id>
</mixed-citation></ref><ref id="R18"><label>[18]</label><mixed-citation publication-type="journal"><name><surname>Dial</surname><given-names>S</given-names></name>, <name><surname>Delaney</surname><given-names>JA</given-names></name>, <name><surname>Barkun</surname><given-names>AN</given-names></name>, <name><surname>Suissa</surname><given-names>S</given-names></name>. <article-title>Use of gastric acid-suppressive agents and the risk of community-acquired <italic toggle="yes">Clostridium difficile</italic>-associated disease</article-title>. <source>J Am Med Assoc</source>
<year>2005</year>
<month>Dec</month>
<day>21</day>;<volume>294</volume>(<issue>23</issue>):<fpage>2989</fpage>&#x02013;<lpage>95</lpage>.</mixed-citation></ref><ref id="R19"><label>[19]</label><mixed-citation publication-type="journal"><name><surname>Deshpande</surname><given-names>A</given-names></name>, <name><surname>Pant</surname><given-names>C</given-names></name>, <name><surname>Pasupuleti</surname><given-names>V</given-names></name>, <name><surname>Rolston</surname><given-names>DD</given-names></name>, <name><surname>Jain</surname><given-names>A</given-names></name>, <name><surname>Deshpande</surname><given-names>N</given-names></name>, <etal/>
<article-title>Association between proton pump inhibitor therapy and <italic toggle="yes">Clostridium difficile</italic> infection in a meta-analysis</article-title>. <source>Clin Gastroenterol Hepatol</source>
<year>2012</year>;<volume>10</volume>:<fpage>225</fpage>&#x02013;<lpage>33</lpage>.<pub-id pub-id-type="pmid">22019794</pub-id>
</mixed-citation></ref><ref id="R20"><label>[20]</label><mixed-citation publication-type="journal"><name><surname>Harvey</surname><given-names>RB</given-names></name>, <name><surname>Norman</surname><given-names>KN</given-names></name>, <name><surname>Andrews</surname><given-names>K</given-names></name>, <name><surname>Norby</surname><given-names>B</given-names></name>, <name><surname>Hume</surname><given-names>ME</given-names></name>, <name><surname>Scanlan</surname><given-names>CM</given-names></name>, <etal/>
<article-title><italic toggle="yes">Clostridium difficile</italic> in retail meat and processing in Texas</article-title>. <source>J Vet Diagn Invest</source>
<year>2011</year>;<volume>23</volume>:<fpage>807</fpage>&#x02013;<lpage>11</lpage>.<pub-id pub-id-type="pmid">21908329</pub-id>
</mixed-citation></ref><ref id="R21"><label>[21]</label><mixed-citation publication-type="journal"><name><surname>Songer</surname><given-names>JG</given-names></name>, <name><surname>Trinh</surname><given-names>HT</given-names></name>, <name><surname>Killgore</surname><given-names>GE</given-names></name>, <name><surname>Thompson</surname><given-names>AD</given-names></name>, <name><surname>McDonald</surname><given-names>LC</given-names></name>, <name><surname>Limbago</surname><given-names>BM</given-names></name>. <article-title><italic toggle="yes">Clostridium difficile</italic> in retail meat products, USA</article-title>. <source>Emerg Infect Dis</source>
<year>2007</year>;<volume>2009</volume>(<issue>15</issue>):<fpage>819</fpage>&#x02013;<lpage>21</lpage>.</mixed-citation></ref><ref id="R22"><label>[22]</label><mixed-citation publication-type="journal"><name><surname>Weese</surname><given-names>JS</given-names></name>. <article-title>Clostridium difficile in foodeinnocent bystander or serious threat?</article-title>
<source>Clin Microbiol Infect</source>
<year>2010</year>;<volume>16</volume>:<fpage>3</fpage>&#x02013;<lpage>10</lpage>.</mixed-citation></ref><ref id="R23"><label>[23]</label><mixed-citation publication-type="journal"><name><surname>Limbago</surname><given-names>B</given-names></name>, <name><surname>Thompson</surname><given-names>AD</given-names></name>, <name><surname>Greene</surname><given-names>SA</given-names></name>, <name><surname>MacCannell</surname><given-names>D</given-names></name>, <name><surname>MacGowan</surname><given-names>CE</given-names></name>, <name><surname>Jolbitado</surname><given-names>B</given-names></name>, <etal/>
<article-title>Development of a consensus method for culture of <italic toggle="yes">Clostridium difficile</italic> from meat and its use in a survey of U.S. retail meats</article-title>. <source>Food Microbiol</source>
<year>2012</year>;<volume>32</volume>:<fpage>448</fpage>&#x02013;<lpage>51</lpage>.<pub-id pub-id-type="pmid">22986214</pub-id>
</mixed-citation></ref><ref id="R24"><label>[24]</label><mixed-citation publication-type="confproc"><name><surname>Jury</surname><given-names>LA</given-names></name>, <name><surname>Kundrapu</surname><given-names>S</given-names></name>, <name><surname>Cadnum</surname><given-names>J</given-names></name>, <name><surname>Sitzlar</surname><given-names>BM</given-names></name>, <name><surname>Donskey</surname><given-names>CJ</given-names></name>. <source>Do patients with recent Clostridium difficile infection present a significant risk for transmission in the outpatient clinic setting</source>. <conf-name>In: Presented at the interscience conference on antimicrobial agents and chemotherapy; September 17</conf-name>, <conf-date>2011</conf-date>. <fpage>Abstract#220</fpage>.</mixed-citation></ref><ref id="R25"><label>[25]</label><mixed-citation publication-type="journal"><name><surname>Matsuki</surname><given-names>S</given-names></name>, <name><surname>Ozaki</surname><given-names>E</given-names></name>, <name><surname>Shozu</surname><given-names>M</given-names></name>, <name><surname>Inoue</surname><given-names>M</given-names></name>, <name><surname>Shimizu</surname><given-names>S</given-names></name>, <name><surname>Yamaguchi</surname><given-names>N</given-names></name>, <etal/>
<article-title>Colonization by Clostridium difficile of neonates in a hospital, and infants and children in three day-care facilities of Kanazawa, Japan</article-title>. <source>Int Microbiol</source>
<year>2005</year>;<volume>8</volume>:<fpage>43</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="pmid">15906260</pub-id>
</mixed-citation></ref><ref id="R26"><label>[26]</label><mixed-citation publication-type="journal"><name><surname>P&#x000e9;pin</surname><given-names>J</given-names></name>, <name><surname>Gonzales</surname><given-names>M</given-names></name>, <name><surname>Valiquette</surname><given-names>L</given-names></name>. <article-title>Risk of secondary cases of Clostridium difficile infection among household contacts of index cases</article-title>. <source>J Infect</source>
<year>2012</year>;<volume>64</volume>:<fpage>387</fpage>&#x02013;<lpage>90</lpage>.<pub-id pub-id-type="pmid">22227466</pub-id>
</mixed-citation></ref></ref-list></back><floats-group><table-wrap position="float" id="T1"><label>Table 1</label><caption><p id="P18">Pulsed-field gel electrophoresis (PFGE) type among community-associated <italic toggle="yes">C. difficile</italic> infection (<italic toggle="yes">N</italic> = 588).</p></caption><table frame="hsides" rules="none"><colgroup span="1"><col align="left" valign="middle" span="1"/><col align="left" valign="middle" span="1"/></colgroup><thead><tr><th align="left" valign="top" rowspan="1" colspan="1">PFGE type</th><th align="left" valign="top" rowspan="1" colspan="1"><italic toggle="yes">N</italic> (%)</th></tr><tr><th colspan="2" align="left" valign="middle" rowspan="1">
<hr/>
</th></tr></thead><tbody><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP1</td><td align="center" valign="top" rowspan="1" colspan="1">138 (23.5)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP2</td><td align="center" valign="top" rowspan="1" colspan="1">16 (2.8)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP3</td><td align="center" valign="top" rowspan="1" colspan="1">4 (0.7)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP4</td><td align="center" valign="top" rowspan="1" colspan="1">63 (10.7)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP5</td><td align="center" valign="top" rowspan="1" colspan="1">7 (1.2)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP6</td><td align="center" valign="top" rowspan="1" colspan="1">38 (6.5)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP7</td><td align="center" valign="top" rowspan="1" colspan="1">20 (3.4)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP8</td><td align="center" valign="top" rowspan="1" colspan="1">2 (0.3)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP9</td><td align="center" valign="top" rowspan="1" colspan="1">22 (3.8)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP10</td><td align="center" valign="top" rowspan="1" colspan="1">12 (2.0)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP11</td><td align="center" valign="top" rowspan="1" colspan="1">67 (11.4)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">NAP12</td><td align="center" valign="top" rowspan="1" colspan="1">16 (2.8)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">Unnamed</td><td align="center" valign="top" rowspan="1" colspan="1">183 (31.1)</td></tr></tbody></table></table-wrap></floats-group></article>