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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="1.3" xml:lang="en" article-type="research-article"><?properties manuscript?><processing-meta base-tagset="archiving" mathml-version="3.0" table-model="xhtml" tagset-family="jats"><restricted-by>pmc</restricted-by></processing-meta><front><journal-meta><journal-id journal-id-type="nlm-journal-id">8004854</journal-id><journal-id journal-id-type="pubmed-jr-id">536</journal-id><journal-id journal-id-type="nlm-ta">Am J Infect Control</journal-id><journal-id journal-id-type="iso-abbrev">Am J Infect Control</journal-id><journal-title-group><journal-title>American journal of infection control</journal-title></journal-title-group><issn pub-type="ppub">0196-6553</issn><issn pub-type="epub">1527-3296</issn></journal-meta><article-meta><article-id pub-id-type="pmid">36535319</article-id><article-id pub-id-type="pmc">11306588</article-id><article-id pub-id-type="doi">10.1016/j.ajic.2022.12.003</article-id><article-id pub-id-type="manuscript">HHSPA2012232</article-id><article-categories><subj-group subj-group-type="heading"><subject>Article</subject></subj-group></article-categories><title-group><article-title>Investigation of a <italic toggle="yes">Candida auris</italic> outbreak in a skilled nursing facility &#x02014; Virginia, United States, October 2020&#x02013;June 2021</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Waters</surname><given-names>Ansley</given-names></name><degrees>MPH, CHES</degrees><xref rid="A1" ref-type="aff">a</xref><xref rid="CR1" ref-type="corresp">*</xref></contrib><contrib contrib-type="author"><name><surname>Chommanard</surname><given-names>Christina</given-names></name><degrees>MPH</degrees><xref rid="A1" ref-type="aff">a</xref></contrib><contrib contrib-type="author"><name><surname>Baltozer</surname><given-names>Sara</given-names></name><degrees>MPH</degrees><xref rid="A1" ref-type="aff">a</xref></contrib><contrib contrib-type="author"><name><surname>Angel</surname><given-names>Luisa Cortes</given-names></name><degrees>BSc</degrees><xref rid="A1" ref-type="aff">a</xref></contrib><contrib contrib-type="author"><name><surname>Abdelfattah</surname><given-names>Rehab</given-names></name><degrees>MD, MPH, CIC</degrees><xref rid="A1" ref-type="aff">a</xref></contrib><contrib contrib-type="author"><name><surname>Lyman</surname><given-names>Meghan</given-names></name><degrees>MD</degrees><xref rid="A2" ref-type="aff">b</xref></contrib><contrib contrib-type="author"><name><surname>Forsberg</surname><given-names>Kaitlin</given-names></name><degrees>MPH</degrees><xref rid="A2" ref-type="aff">b</xref></contrib><contrib contrib-type="author"><name><surname>Misas</surname><given-names>Elizabeth</given-names></name><degrees>MSc, PhD</degrees><xref rid="A2" ref-type="aff">b</xref></contrib><contrib contrib-type="author"><name><surname>Litvintseva</surname><given-names>Anastasia P.</given-names></name><degrees>PhD</degrees><xref rid="A2" ref-type="aff">b</xref></contrib><contrib contrib-type="author"><name><surname>Fields</surname><given-names>Virgie</given-names></name><degrees>MS, CPH, CIC</degrees><xref rid="A1" ref-type="aff">a</xref></contrib><contrib contrib-type="author"><name><surname>Lineberger</surname><given-names>Sarah</given-names></name><degrees>MPH</degrees><xref rid="A1" ref-type="aff">a</xref></contrib><contrib contrib-type="author"><name><surname>Bernard</surname><given-names>Shaina</given-names></name><degrees>Pharm D</degrees><xref rid="A1" ref-type="aff">a</xref></contrib></contrib-group><aff id="A1"><label>a</label>Virginia Department of Health, Office of Epidemiology, Richmond, VA</aff><aff id="A2"><label>b</label>Mycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA</aff><author-notes><corresp id="CR1"><label>*</label>Address correspondence to Ansley Virginia Waters, MPH, CHES, Deloitte Consulting LLP, 1919 N Lynn St, Rosslyn, Arlington, VA 22209. <email>watersav@gwmail.gwu.edu</email> (A. Waters).</corresp></author-notes><pub-date pub-type="nihms-submitted"><day>2</day><month>8</month><year>2024</year></pub-date><pub-date pub-type="ppub"><month>4</month><year>2023</year></pub-date><pub-date pub-type="epub"><day>17</day><month>12</month><year>2022</year></pub-date><pub-date pub-type="pmc-release"><day>08</day><month>8</month><year>2024</year></pub-date><volume>51</volume><issue>4</issue><fpage>472</fpage><lpage>474</lpage><abstract id="ABS1"><p id="P1"><italic toggle="yes">Candida auris</italic>, an emerging multi-drug resistant organism, is an urgent public health threat. We report on a <italic toggle="yes">C. auris</italic> outbreak investigation at a Virginia ventilator skilled nursing facility. During October 2020-June 2021, we identified 28 cases among residents in the ventilator unit. Genomic evidence suggested &#x02265;2 distinct <italic toggle="yes">C. auris</italic> introductions to the facility. We identified multiple infection and prevention control challenges, highlighting the importance of strengthening multi-drug resistant organism prevention efforts at ventilator skilled nursing facilities.</p></abstract><kwd-group><kwd>Emerging infectious disease</kwd><kwd>Ventilator skilled nursing facility</kwd><kwd>Multidrug resistant organism</kwd><kwd>Infection prevention and control</kwd></kwd-group></article-meta></front><body><sec id="S1"><title>BACKGROUND</title><p id="P2"><italic toggle="yes">Candida auris</italic> is a multi-drug resistant organism (MDRO) with rising international burden and propensity for transmission in healthcare settings, especially ventilator-capable skilled nursing facilities (vSNFs).<sup><xref rid="R1" ref-type="bibr">1</xref>&#x02013;<xref rid="R3" ref-type="bibr">3</xref></sup> During the COVID-19 pandemic, <italic toggle="yes">C. auris</italic> outbreaks have occurred in healthcare facilities across the Mid-Atlantic region of the United States.<sup><xref rid="R4" ref-type="bibr">4</xref>&#x02013;<xref rid="R7" ref-type="bibr">7</xref></sup> There are 5 clades of <italic toggle="yes">C. auris</italic>, with clade I predominant within the Mid-Atlantic region.<sup><xref rid="R8" ref-type="bibr">8</xref></sup> Before 2020, Virginia Department of Health (VDH) only observed 2 <italic toggle="yes">C. auris</italic> cases. After a year without new cases, VDH identified its third clinical case in June 2020 in acute care hospital A. We performed an investigation at vSNF A, which is in the same healthcare transfer network as hospital A, to identify the potential source of the index case, understand the facility&#x02019;s <italic toggle="yes">C. auris</italic> burden, and implement prevention measures.</p></sec><sec id="S2"><title>METHODS</title><p id="P3">VDH assisted with case finding and conducted infection prevention and control (IPC) assessments. A case was a resident with a clinical or screening specimen positive for <italic toggle="yes">C. auris</italic> and at the vSNF from October 2020 to June 2021.<sup><xref rid="R9" ref-type="bibr">9</xref></sup> Screening cases were residents with <italic toggle="yes">C. auris</italic> groin/axilla swabs that were collected on admission or during biweekly/monthly point prevalence surveys (PPSs) on ventilator and step-down units and were positive via PCR or culture.<sup><xref rid="R10" ref-type="bibr">10</xref></sup> Clinical cases were residents with clinical specimens positive for <italic toggle="yes">C. auris</italic>. Using laboratory and medical records, data were collected on: positive specimens, patient characteristics, facility location, antifungal susceptibility testing (AFST), and whole genome sequencing (WGS). SAS 9.4 was used to calculate frequency of case characteristics.</p></sec><sec id="S3"><title>RESULTS</title><p id="P4">VDH identified 39 <italic toggle="yes">C. auris</italic> cases during June 2020 to June 2021, 28 of which were found during the vSNF A investigation from October 2020 to June 2021. Most (93%) vSNF A cases were screening cases (<xref rid="F1" ref-type="fig">Fig 1</xref>). Three clinical cases were identified: 2 from urine and 1 from blood. One clinical case was initially identified as a screening case, but had a positive urine specimen 7 months later. Most cases (93%) were identified in the 46-bed ventilator unit, and 3 of these cases were later transferred to the step-down unit (<xref rid="T1" ref-type="table">Table 1</xref>). Half of cases changed beds during their stay, but most bed changes were within the same unit. Both units have mostly double-occupancy rooms. Nearly all cases had respiratory failure (96%) and prior colonization/infection with a Carbapenemase-producing organism (89%). No cases had recent health care stays abroad or in other regions.</p><p id="P5">AFST results were available for 15 isolates; all were resistant to fluconazole. WGS results were available for 8 cases: 5 clade I (average difference of 8 single nucleotide polymorphisms [SNPs]) and 3 clade III (average difference of 11 SNPs). The average difference between clade I and III was 43,523 SNPs. Among cases with WGS results, all 8 were screening cases identified in the ventilator unit, where all were originally admitted. Three cases (2 clade I, 1 clade III) had stays in the same room. Two cases occupied the same bed at different times, but these cases were identified as different clades. Four clade I and 1 clade III cases were male, with average age of 61 and 68, respectively. All 8 had respiratory failure and co-colonization with a Carbapenemase-producing organism.</p><p id="P6">We identified several IPC breaches, including failure to: implement appropriate contact precautions, cohort residents by MDRO status, and use personal protective equipment. Despite alcohol-based hand sanitizer availability throughout the facility, lapses in staff hand hygiene compliance were observed. The vSNF used <italic toggle="yes">C. auris</italic>-appropriate disinfection products from EPA&#x02019;s List P, but bioburden testing indicated that disinfection was not thorough for high-touch surfaces. The facility lacked a designated infection preventionist for over 6 months.</p></sec><sec id="S4"><title>DISCUSSION</title><p id="P7">This investigation found 28 cases among residents of 2 high acuity units that were screened. Most cases occurred among residents with risk factors like respiratory failure and colonization with another MDRO. On-site assessments identified IPC gaps contributing to <italic toggle="yes">C. auris</italic> transmission.<sup><xref rid="R3" ref-type="bibr">3</xref>&#x02013;<xref rid="R5" ref-type="bibr">5</xref>,<xref rid="R10" ref-type="bibr">10</xref></sup> The facility continues to identify cases and suspected transmission, likely a result of unresolved IPC deficiencies and lack of an infection preventionist.</p><p id="P8">Cases belonged to 2 identified clades, demonstrating that this facility, specifically the ventilator unit, experienced multiple <italic toggle="yes">C. auris</italic> introductions with subsequent spread of both clades. There is no evidence of cases introducing <italic toggle="yes">C. auris</italic> acquired abroad or in other US regions. The <italic toggle="yes">C. auris</italic> risk factors among cases reflect residents who frequently transfer between facilities, increasing likelihood of introductions from other facilities. Before this cluster, clade I was predominant in the Mid-Atlantic region. <sup><xref rid="R8" ref-type="bibr">8</xref></sup> Clade III isolates have recently been identified at other Mid-Atlantic facilities (unpublished CDC data), so clade III may have been introduced by a local resident, not necessarily by a resident from another country or US region. Within each clade, isolates were highly related to others in the region, further suggesting spread between facilities.<sup><xref rid="R8" ref-type="bibr">8</xref></sup> Patient characteristics among clade I and clade III cases appeared similar, though few cases had WGS data available. Future research should examine how multiple <italic toggle="yes">C. auris</italic> clades spread in the context of an outbreak.</p></sec><sec id="S5"><title>LIMITATIONS</title><p id="P9">This investigation was subject to several limitations. Data on room history and domestic healthcare exposures were incomplete. Cases that were not screened could have been missed. WGS results were only available for a subset of cases, so conclusions based on comparisons between clades are limited. Screening cases identified on admission were not distinguished from those during PPS, which would allow for a better understanding of how often <italic toggle="yes">C. auris</italic> was introduced from other facilities and degree of internal transmission.</p></sec><sec id="S6"><title>CONCLUSIONS</title><p id="P10">Given the persistent <italic toggle="yes">C. auris</italic> burden, vSNF A must prioritize MDRO prevention strategies. The local health department continues to assist with PPSs, admission screenings, addressing IPC barriers, and interfacility communication.<sup><xref rid="R10" ref-type="bibr">10</xref></sup> VDH routinely communicates with regional partners, as Virginia residents commonly receive care in surrounding jurisdictions. Strong IPC practices in vSNFs are crucial to prevent transmission from known cases and mitigate the risk of unidentified introductions given the high prevalence of <italic toggle="yes">C. auris</italic> in the Mid-Atlantic region.<sup><xref rid="R3" ref-type="bibr">3</xref>,<xref rid="R4" ref-type="bibr">4</xref>,<xref rid="R6" ref-type="bibr">6</xref>,<xref rid="R7" ref-type="bibr">7</xref></sup> Future public health education will emphasize that MDRO prevention strategies must remain a priority to control the spread of <italic toggle="yes">C. auris</italic>.</p></sec></body><back><ack id="S7"><title>Acknowledgments</title><p id="P11">The authors would like to acknowledge the Virginia Division of Consolidated Laboratory Services, the Maryland Public Health Laboratory, the Centers for Disease Control and Prevention Mycotic Diseases Branch, and the Centers for Disease Control and Prevention Antibiotic Resistance Laboratory Network for their assistance in this investigation.</p><sec id="S8"><title>Funding/support:</title><p id="P12">This work was supported in part by Ansley Waters&#x02019;s appointment to the Applied Epidemiology Fellowship Program administered by the Council of State and Territorial Epidemiologists (CSTE) and funded by the Centers for Disease Control and Prevention (CDC) Cooperative Agreement Number 1NU38OT000297-03-00. Elizabeth Misas receives research support from the Oak Ridge Institute for Science and Education (ORISE). Sarah Lineberger receives support from the Virginia Department of Health and the Epidemiology and Laboratory Capacity for Prevention and Control of Emerging Infectious Diseases via the Centers for Disease Control and Prevention. Lineberger has a leadership or fiduciary role in the following organizations: Virginia HAI Advisory Group, Virginia COVID-19 Long-Term Care Task Force, and the CSTE HAI Subcommittee.</p></sec><sec id="S9"><title>DISCLAIMER</title><p id="P13">The findings and conclusions of this paper are those of the authors and do not necessarily represent the official position of the US Centers for Disease Control and Prevention (CDC).</p></sec></ack><fn-group><fn fn-type="COI-statement" id="FN1"><p id="P14">Conflicts of interest: None to report.</p></fn></fn-group><ref-list><title>References</title><ref id="R1"><label>1.</label><mixed-citation publication-type="journal"><name><surname>Halili</surname><given-names>MLM</given-names></name>, <name><surname>Sorensen</surname><given-names>GG</given-names></name>. <article-title>Incidence and management of Candida Auris in a skilled nursing home</article-title>. <source>Am J Infect Control</source>. <year>2020</year>;<volume>48</volume>:<fpage>S15</fpage>&#x02013;<lpage>S16</lpage>.</mixed-citation></ref><ref id="R2"><label>2.</label><mixed-citation publication-type="journal"><name><surname>Eckbo</surname><given-names>EJ</given-names></name>, <name><surname>Wong</surname><given-names>T</given-names></name>, <name><surname>Bharat</surname><given-names>A</given-names></name>, <etal/>
<article-title>First reported outbreak of the emerging pathogen Candida auris in Canada</article-title>. <source>Am J Infect Control</source>. <year>2021</year>;<volume>49</volume>:<fpage>804</fpage>&#x02013;<lpage>807</lpage>.<pub-id pub-id-type="pmid">33485922</pub-id>
</mixed-citation></ref><ref id="R3"><label>3.</label><mixed-citation publication-type="journal"><name><surname>Southwick</surname><given-names>KL</given-names></name>, <name><surname>Greenko</surname><given-names>JA</given-names></name>, <name><surname>Adams</surname><given-names>E</given-names></name>, <etal/>
<article-title>A description of the first Candida auriscolonized individuals in New York State, 2016&#x02013;2017</article-title>. <source>Am J Infect Control</source>. <year>2022</year>;<volume>50</volume>:<fpage>358</fpage>&#x02013;<lpage>360</lpage>.<pub-id pub-id-type="pmid">34793894</pub-id>
</mixed-citation></ref><ref id="R4"><label>4.</label><mixed-citation publication-type="webpage"><collab>Pennsylvania Department of Health</collab>. <source>Alert: New outbreak and containment of Candida auris in PA healthcare facilities</source>; <year>2020</year>. <date-in-citation>Accessed August 13, 2021.</date-in-citation>
<comment><ext-link xlink:href="https://www.health.pa.gov/topics/Documents/HAN/2020-PAHAN-522-08-18-ALT-Candida%20aur.pdf" ext-link-type="uri">https://www.health.pa.gov/topics/Documents/HAN/2020-PAHAN-522-08-18-ALT-Candida%20aur.pdf</ext-link></comment>.</mixed-citation></ref><ref id="R5"><label>5.</label><mixed-citation publication-type="journal"><name><surname>Prestel</surname><given-names>C</given-names></name>, <name><surname>Anderson</surname><given-names>E</given-names></name>, <name><surname>Forsberg</surname><given-names>K</given-names></name>, <etal/>
<article-title>Candida auris outbreak in a COVID-19 specialty care unit &#x02014; Florida, July&#x02013;August 2020</article-title>. <source>MMWR Morb Mortal Wkly Rep</source>. <year>2021</year>;<volume>70</volume>:<fpage>56</fpage>&#x02013;<lpage>57</lpage>.<pub-id pub-id-type="pmid">33444298</pub-id>
</mixed-citation></ref><ref id="R6"><label>6.</label><mixed-citation publication-type="journal"><name><surname>Lyman</surname><given-names>M</given-names></name>, <name><surname>Forsberg</surname><given-names>K</given-names></name>, <name><surname>Reuben</surname><given-names>J</given-names></name>, <etal/>
<article-title>Notes from the field: Transmission of pan-resistant and echinocandin-resistant Candida auris in health care facilities = Texas and the District of Columbia, January&#x02013;April 2021</article-title>. <source>MMWR Morb Mortal Wkly Rep</source>. <year>2021</year>;<volume>70</volume>:<fpage>1022</fpage>&#x02013;<lpage>1023</lpage>.<pub-id pub-id-type="pmid">34292928</pub-id>
</mixed-citation></ref><ref id="R7"><label>7.</label><mixed-citation publication-type="webpage"><collab>Centers for Disease Control and Prevention</collab>. <source>Tracking Candida auri</source>s; <year>2021</year>. <date-in-citation>Accessed August 13, 2021.</date-in-citation>
<comment><ext-link xlink:href="https://www.cdc.gov/fungal/candida-auris/tracking-c-auris.html" ext-link-type="uri">https://www.cdc.gov/fungal/candida-auris/tracking-c-auris.html</ext-link></comment>.</mixed-citation></ref><ref id="R8"><label>8.</label><mixed-citation publication-type="journal"><name><surname>Chow</surname><given-names>NA</given-names></name>, <name><surname>Gade</surname><given-names>L</given-names></name>, <name><surname>Tsay</surname><given-names>SV</given-names></name>, <etal/>
<article-title>Multiple introductions and subsequent transmission of multidrug-resistant Candida auris in the USA: A molecular epidemiological survey</article-title>. <source>Lancet Infect Dis</source>. <year>2018</year>;<volume>18</volume>:<fpage>1377</fpage>&#x02013;<lpage>1384</lpage>.<pub-id pub-id-type="pmid">30293877</pub-id>
</mixed-citation></ref><ref id="R9"><label>9.</label><mixed-citation publication-type="journal"><collab>Centers for Disease Control and Prevention</collab>. <source>National Notifiable Diseases Surveillance System (NNDSS) Candida auris 2019 Case Definition</source>. <date-in-citation>Accessed April 16, 2021.</date-in-citation>
<comment><ext-link xlink:href="https://ndc.services.cdc.gov/case-definitions/candida-auris-2019/" ext-link-type="uri">https://ndc.services.cdc.gov/case-definitions/candida-auris-2019/</ext-link></comment>.</mixed-citation></ref><ref id="R10"><label>10.</label><mixed-citation publication-type="webpage"><collab>Centers for Disease Control and Prevention</collab>. <source>Interim Guidance for a Public Health Response to Contain Novel or Targeted Multidrug-resistant Organisms (MDROs)</source>. <date-in-citation>Accessed August 13, 2021.</date-in-citation>
<comment><ext-link xlink:href="https://www.cdc.gov/hai/pdfs/containment/Health-Response-Contain-MDRO-H.pdf" ext-link-type="uri">https://www.cdc.gov/hai/pdfs/containment/Health-Response-Contain-MDRO-H.pdf</ext-link></comment>.</mixed-citation></ref></ref-list></back><floats-group><fig position="float" id="F1"><label>Fig 1.</label><caption><p id="P15"><italic toggle="yes">C. auris</italic> colonization screening results<sup><xref rid="P17" ref-type="other">^</xref><xref rid="P18" ref-type="other">&#x02020;</xref></sup> in vSNF A by month, October 2020-June 2021.</p><p id="P16">*Designates 1 clinical case identified during the month. One clinical case was identified through a blood specimen and one was identified through a urine specimen.</p><p id="P17"><sup>^</sup>Includes colonization swabs collected during point prevalence surveys and admission screening.</p><p id="P18"><sup>&#x02020;</sup>Percent positivity was calculated based on results from all point prevalence surveys (PPSs), admission screenings, and clinical cases in a given month.</p></caption><graphic xlink:href="nihms-2012232-f0001" position="float"/></fig><table-wrap position="float" id="T1"><label>Table 1</label><caption><p id="P19">Demographic and clinical characteristics of patients colonized or infected by <italic toggle="yes">C. auris</italic> in vSNF A, October 2020 - June 2021 (n = 28)</p></caption><table frame="hsides" rules="none"><colgroup span="1"><col align="left" valign="middle" span="1"/><col align="left" valign="middle" span="1"/><col align="left" valign="middle" span="1"/></colgroup><thead><tr><th align="left" valign="middle" rowspan="1" colspan="1">Characteristic</th><th align="left" valign="top" rowspan="1" colspan="1"/><th align="left" valign="middle" rowspan="1" colspan="1">Count (%)</th></tr><tr><th colspan="3" align="left" valign="top" rowspan="1">
<hr/>
</th></tr></thead><tbody><tr><td align="left" valign="top" rowspan="1" colspan="1">Male sex</td><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">15 (54)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">Age, mean (Std dev)</td><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">59 (15)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">Race/ethnicity</td><td align="left" valign="top" rowspan="1" colspan="1">NH Black<xref rid="TFN1" ref-type="table-fn">*</xref></td><td align="left" valign="top" rowspan="1" colspan="1">14 (50)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">NH White</td><td align="left" valign="top" rowspan="1" colspan="1">9 (32)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Hispanic</td><td align="left" valign="top" rowspan="1" colspan="1">4 (14)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">NH Asian</td><td align="left" valign="top" rowspan="1" colspan="1">1 (4)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">Comorbidities and risk factors</td><td align="left" valign="top" rowspan="1" colspan="1">Total number of underlying comorbidities, average (std dev)</td><td align="left" valign="top" rowspan="1" colspan="1">24.0 (9)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Acute or chronic respiratory failure</td><td align="left" valign="top" rowspan="1" colspan="1">27 (96)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Type 2 diabetes</td><td align="left" valign="top" rowspan="1" colspan="1">15 (54)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Unresponsive wakefulness syndrome<sup><xref rid="TFN2" ref-type="table-fn">&#x02020;</xref></sup></td><td align="left" valign="top" rowspan="1" colspan="1">14 (50)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Infection/colonization with Carbapenemase-producing organism</td><td align="left" valign="top" rowspan="1" colspan="1">25 (89)</td></tr><tr><td rowspan="2" align="left" valign="top" colspan="1">Location of residents with <italic toggle="yes">C. auris</italic> case</td><td align="left" valign="top" rowspan="1" colspan="1">Identified in the ventilator unit</td><td align="left" valign="top" rowspan="1" colspan="1">26 (93)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">Identified in the step-down unit</td><td align="left" valign="top" rowspan="1" colspan="1">2 (7)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Changed beds during their stay</td><td align="left" valign="top" rowspan="1" colspan="1">14 (50)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Changed units during their stay</td><td align="left" valign="top" rowspan="1" colspan="1">3 (11)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">AFST results (n = 15)</td><td align="left" valign="top" rowspan="1" colspan="1">Resistant to fluconazole</td><td align="left" valign="top" rowspan="1" colspan="1">15 (100)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Resistant to amphotericin B</td><td align="left" valign="top" rowspan="1" colspan="1">0 (0)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Resistant to echinocandins</td><td align="left" valign="top" rowspan="1" colspan="1">0 (0)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1">WGS results (n = 8)</td><td align="left" valign="top" rowspan="1" colspan="1">Clade I</td><td align="left" valign="top" rowspan="1" colspan="1">5 (63)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">&#x02003;Average SNPs between clade I isolates (range)</td><td align="left" valign="top" rowspan="1" colspan="1">8 (5&#x02013;13)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">Clade III</td><td align="left" valign="top" rowspan="1" colspan="1">3 (38)</td></tr><tr><td align="left" valign="top" rowspan="1" colspan="1"/><td align="left" valign="top" rowspan="1" colspan="1">&#x02003;Average SNPs between clade III isolates (range)</td><td align="left" valign="top" rowspan="1" colspan="1">11 (8&#x02013;16)</td></tr></tbody></table><table-wrap-foot><fn id="TFN1"><label>*</label><p id="P20">Non-Hispanic (NH) Black includes one resident who was multiracial, Black/other.</p></fn><fn id="TFN2"><label>&#x02020;</label><p id="P21">Previously referred to as vegetative state.</p></fn></table-wrap-foot></table-wrap></floats-group></article>