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A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage

CITE Title : A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage Personal Author(s) : Deng, Xianding;Gu, Wei;Federman, Scot;du Plessis, Louis;Pybus, Oliver G.;Faria, Nuno;Wang, Candace;Yu, Guixia;Pan, Chao-Yang;Guevara, Hugo;Sotomayor-Gonzalez, Alicia;Zorn, Kelsey;Gopez, Allan;Servellita, Venice;Hsu, Elaine;Miller, Steve;Bedford, Trevor;Greninger, Alexander L.;Roychoudhury, Pavitra;Starita, Lea M.;Famulare, Michael;Chu, Helen Y.;Shendure, Jay;Jerome, Keith R.;Anderson, Catie;Gangavarapu, Karthik;Zeller, Mark;Spencer, Emily;Andersen, Kristian G.;MacCannell, Duncan;Paden, Clinton R.;Li, Yan;Zhang, Jing;Tong, Suxiang;Armstrong, Gregory;Morrow, Scott;Willis, Matthew;Matyas, Bela T.;Mase, Sundari;Kasirye, Olivia;Park, Maggie;Chan, Curtis;Yu, Alexander T.;Chai, Shua J.;Villarino, Elsa;Bonin, Brandon;Wadford, Debra A.;Chiu, Charles Y.; Published Date : March 30 2020 Source : medRxiv. URL : https://stacks.cdc.gov/view/cdc/92227 Deng, Xianding et al. (2020). A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage. Deng, Xianding et al. "A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage" (2020) Deng, Xianding et al. "A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage" , 2020 Export RIS Citation Information.

:

Deng, Xianding ;

Gu, Wei

March 30 2020 | medRxiv.

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The COVID-19 pandemic caused by the novel coronavirus SARS-CoV-2 has spread globally, resulting in >300,000 reported cases worldwide as of March 21st,...
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California

CITE Title : Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California Personal Author(s) : Deng, Xianding;Gu, Wei;Federman, Scot;du Plessis, Louis;Pybus, Oliver G.;Faria, Nuno;Wang, Candace;Yu, Guixia;Bushnell, Brian;Pan, Chao-Yang;Guevara, Hugo;Sotomayor-Gonzalez, Alicia;Zorn, Kelsey;Gopez, Allan;Servellita, Venice;Hsu, Elaine;Miller, Steve;Bedford, Trevor;Greninger, Alexander L.;Roychoudhury, Pavitra;Starita, Lea M.;Famulare, Michael;Chu, Helen Y.;Shendure, Jay;Jerome, Keith R.;Anderson, Catie;Gangavarapu, Karthik;Zeller, Mark;Spencer, Emily;Andersen, Kristian G.;MacCannell, Duncan;Paden, Clinton R.;Li, Yan;Zhang, Jing;Tong, Suxiang;Armstrong, Gregory;Morrow, Scott;Willis, Matthew;Matyas, Bela T.;Mase, Sundari;Kasirye, Olivia;Park, Maggie;Masinde, Godfred;Chan, Curtis;Yu, Alexander T.;Chai, Shua J.;Villarino, Elsa;Bonin, Brandon;Wadford, Debra A.;Chiu, Charles Y.; Published Date : June 08 2020 Source : Science. 2020; URL : https://stacks.cdc.gov/view/cdc/89349 Deng, Xianding et al. (2020). Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California. Deng, Xianding et al. "Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California" (2020) Deng, Xianding et al. "Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California" , 2020 Export RIS Citation Information.

:

Deng, Xianding ;

Gu, Wei

June 08 2020 | Science. 2020;

:

The coronavirus disease 2019 (COVID-19) pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has spread globally, with >365...
Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources

CITE Title : Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources Personal Author(s) : Tsueng, Ginger;Mullen, Julia L.;Alkuzweny, Manar;Cano, Marco;Rush, Benjamin;Haag, Emily;Lin, Jason;Welzel, Dylan J.;Zhou, Xinghua;Qian, Zhongchao;Latif, Alaa Abdel;Hufbauer, Emory;Zeller, Mark;Andersen, Kristian G.;Wu, Chunlei;Su, Andrew I.;Gangavarapu, Karthik;Hughes, Laura D.; Published Date : 4 2023;4-2023; Source : Nat Methods. 20(4):536-540 URL : https://stacks.cdc.gov/view/cdc/131554 Tsueng, Ginger et al. (2023). Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources. 20(4). Tsueng, Ginger et al. "Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources" 20, no. 4 (2023) Tsueng, Ginger et al. "Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources" vol. 20, no. 4, 2023 Export RIS Citation Information.

:

Tsueng, Ginger

;

Mullen, Julia L.

4 2023 | Nat Methods. 20(4):536-540

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Outbreak.info Research Library is a standardized, searchable interface of coronavirus disease 2019 (COVID-19) and severe acute respiratory syndrome co...
Reassortment of Human Rotavirus Gene Segments into G11 Rotavirus Strains

CITE Title : Reassortment of Human Rotavirus Gene Segments into G11 Rotavirus Strains Personal Author(s) : Matthijnssens, Jelle;Rahman, Mustafizur;Ciarlet, Max;Zeller, Mark;Heylen, Elisabeth;Nakagomi, Toyoko;Uchida, Ryuichi;Hassan, Zahid;Azim, Tasnim;Nakagomi, Osamu;Van Ranst, Marc; Published Date : Apr 2010 Source : Emerg Infect Dis. 16(4):625-630. URL : https://stacks.cdc.gov/view/cdc/18128 Matthijnssens, Jelle et al. (2010). Reassortment of Human Rotavirus Gene Segments into G11 Rotavirus Strains. 16(4). Matthijnssens, Jelle et al. "Reassortment of Human Rotavirus Gene Segments into G11 Rotavirus Strains" 16, no. 4 (2010) Matthijnssens, Jelle et al. "Reassortment of Human Rotavirus Gene Segments into G11 Rotavirus Strains" vol. 16, no. 4, 2010 Export RIS Citation Information.

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Matthijnssens, Jelle ;

Rahman, Mustafizur

Apr 2010 | Emerg Infect Dis. 16(4):625-630.

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G11 rotaviruses are believed to be of porcine origin. However, a limited number of G11 rotaviruses have been recently isolated from humans in combinat...
Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations

CITE Title : Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations Personal Author(s) : Gangavarapu, Karthik;Latif, Alaa Abdel;Mullen, Julia L.;Alkuzweny, Manar;Hufbauer, Emory;Tsueng, Ginger;Haag, Emily;Zeller, Mark;Aceves, Christine M.;Zaiets, Karina;Cano, Marco;Zhou, Xinghua;Qian, Zhongchao;Sattler, Rachel;Matteson, Nathaniel L.;Levy, Joshua I.;Lee, Raphael T. C.;Freitas, Lucas;Maurer-Stroh, Sebastian;Suchard, Marc A.;Wu, Chunlei;Su, Andrew I.;Andersen, Kristian G.;Hughes, Laura D.; Corporate Authors(s) : GISAID Core and Curation Team Published Date : 4 2023 Source : Nat Methods. 20(4):512-522 URL : https://stacks.cdc.gov/view/cdc/131736 Gangavarapu, Karthik et al. (2023). Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations. 20(4). Gangavarapu, Karthik et al. "Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations" 20, no. 4 (2023) Gangavarapu, Karthik et al. "Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations" vol. 20, no. 4, 2023 Export RIS Citation Information.

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Gangavarapu, Karthik

;

Latif, Alaa Abdel

4 2023 | Nat Methods. 20(4):512-522

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In response to the emergence of SARS-CoV-2 variants of concern, the global scientific community, through unprecedented effort, has sequenced and share...
Feline Origin of Rotavirus Strain, Tunisia, 2008

CITE Title : Feline Origin of Rotavirus Strain, Tunisia, 2008 Personal Author(s) : Fredj, Mouna Ben Hadj;Heylen, Elisabeth;Zeller, Mark;Fodha, Imene;Benhamida-Rebai, Meriam;Van Ranst, Marc;Matthijnssens, Jelle;Trabelsi, Abdelhalim; Published Date : Apr 2013 Source : Emerg Infect Dis. 19(4):630-634. URL : https://stacks.cdc.gov/view/cdc/18991 Fredj, Mouna Ben Hadj et al. (2013). Feline Origin of Rotavirus Strain, Tunisia, 2008. 19(4). Fredj, Mouna Ben Hadj et al. "Feline Origin of Rotavirus Strain, Tunisia, 2008" 19, no. 4 (2013) Fredj, Mouna Ben Hadj et al. "Feline Origin of Rotavirus Strain, Tunisia, 2008" vol. 19, no. 4, 2013 Export RIS Citation Information.

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Fredj, Mouna Ben Hadj ;

Heylen, Elisabeth

Apr 2013 | Emerg Infect Dis. 19(4):630-634.

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In Tunisia in 2008, an unusual G6P[9] rotavirus, RVA/human-wt/TUN/17237/2008/G6P[9], rarely found in humans, was detected in a child. To determine the...